Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_01840
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Entry
Lm4b_01840 CDS
T00898
Symbol
priA
Name
(GenBank) Putative primosomal replication factor Y
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Pathway
lmc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Lm4b_01840 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmc03400
]
Lm4b_01840 (priA)
Enzymes [BR:
lmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Lm4b_01840 (priA)
DNA repair and recombination proteins [BR:
lmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Lm4b_01840 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
AAA_30
T2SSE
SLFN-g3_helicase
ADDB_N
AAA_19
zinc-ribbons_6
Zot
DUF1236
Viral_helicase1
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
CAS05598
LinkDB
All DBs
Position
complement(1884785..1887178)
Genome browser
AA seq
797 aa
AA seq
DB search
MINIAKVIVDVPAMQVDRPFDYYIPEDLEELIRPGMRVSVPFGNRKIQGFVIALGETEEN
PKLKGVDGVMDLAPVLNEELMELGDWLAEDTLSFRVSAYQAMLPAALRAKYEKYFLRLDE
ENEELEQLFEGYETLDWKVAEARGLLKQIGKWVREGSVEVVYQVKNKITSKKVRVVNCLK
SPHQLAEIIEDMPKNAKAQSRVLAFFQAFEGNEITAAELKKQAETTDATIKKLVDLGILS
IQEKIVSRDPYENHQFEKSESLQLLPDQQTACEKITAATDQETFLIHGVTGSGKTEIYLQ
TIEAKLKEGKEAIVLVPEISLTPQMVERFKSRFGSEVAVLHSALSSGEKYDEWRKIERKE
ARVVVGARSAVFAPFENLGIIIIDEEHEASYKQEDNPRYHARDVAIWRATKYQCPVVLGS
ATPSLESFARAKKGVYTLIELPSRVNDRAMPEVSVVDMREELRKENRTEFSTELLEKIKE
RIAKKEQTVLMLNRRGYSSFVMCRDCGYVVECPNCDISLTYHQSSNQMKCHYCGHEERVP
QKCPSCEGEHIRYFGTGTQKVEESLTKLIPEARVIRMDVDTTRTKGAHEKLLKSFRNHEA
DILLGTQMIAKGLDFPDITLVGVLNADTMLHLPDFRASERTFQLLTQVSGRAGRHERTGE
VIVQSYNPEHYSIEFAKKHDFIGFYNHEMQLRKMGSYPPFYYLTMINVSDENEMKAIRTI
QEMAQFLRGKLGPDAVILGPVPSTITRIKNKYRYQCIIKYKIEPNLKKELKTLITHYQKD
QQKGLTITIDVQPYVLM
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgattaatattgcgaaagtaattgtggacgttccagccatgcaagtggatcgtccattt
gactactatattccagaagatttagaagaacttattcgtccaggtatgcgagtaagtgtc
ccatttggaaatcgtaaaatacaaggatttgtcattgctcttggagaaacagaagaaaac
ccaaaattaaaaggcgttgacggggtgatggatttagcccccgttttaaatgaagaattg
atggaactaggcgattggttagcagaagatacgctgagtttccgggtgtctgcttaccaa
gccatgttaccagccgcgctacgagcaaaatacgaaaaatattttttgcgcttagatgag
gaaaacgaagaattagagcagctatttgaaggctacgaaacactagactggaaagtggca
gaagcccgcggtttgctcaaacaaattggcaaatgggtcagagaaggtagtgtggaagta
gtctaccaagtcaaaaataaaatcacgagtaaaaaagttcgcgttgttaactgtctcaaa
tcaccacaccaactagctgaaataatagaagatatgccgaaaaacgccaaagcacagtca
cgtgtactcgcatttttccaagcttttgaaggcaacgaaattacggcagccgagttaaaa
aaacaggcggaaacaacggatgccacaataaaaaaattagtcgacttagggatactttct
attcaagaaaaaattgtttcgcgtgatccctatgaaaaccaccaatttgaaaaaagtgaa
tcgcttcagttattaccagatcaacaaactgcgtgcgagaaaatcaccgcagcaactgat
caagaaacattcctaatacacggggttactggaagtgggaaaaccgaaatctatttacaa
accatcgaagcaaaattaaaagagggtaaagaagccatcgttttagtaccagaaatttcc
cttaccccacaaatggtagagcgatttaaaagccgctttggaagcgaggtcgcggtacta
catagtgcgctatcttccggagaaaaatacgacgaatggcgcaaaatcgaacgcaaagaa
gcgcgcgttgtcgttggggctcgttccgccgtatttgcaccgtttgaaaatctcggcatt
attattatcgacgaagagcacgaagcgagttacaaacaagaagataatccgcgttatcat
gcaagagatgtagccatttggcgcgcaacaaaatatcaatgtccagtagttctcggaagc
gccacgccgtcccttgaatcttttgctagagcgaaaaaaggtgtgtatacgttaatcgaa
cttcctagccgggtcaatgatcgggcgatgccagaagtgagcgttgtcgacatgcgcgaa
gaattacgcaaagaaaaccgcaccgaattttcgactgaattactagaaaaaatcaaagag
cgaattgccaaaaaagaacaaacagttttaatgctaaatcgccgaggttattcttctttt
gtgatgtgccgtgattgtggttatgttgtggaatgtccgaactgcgatatttcgctcacc
tatcatcaatcgagcaatcaaatgaaatgccattactgcggacatgaagaacgtgttccg
caaaaatgtccgagctgtgagggcgagcatattcgttattttggcaccggtacacaaaaa
gtagaagaaagtttgaccaaattaattccagaagcgcgcgtcatccggatggacgtggat
accactagaacaaaaggtgctcatgaaaaattactcaaaagcttccgcaatcacgaagcc
gatattttacttggaacacaaatgattgccaaaggactagattttccagatattacgtta
gttggcgtattaaatgctgacacaatgcttcatttaccagactttcgcgcttcggaacga
actttccaacttctcactcaagtaagtggacgagcaggtcgacatgagcggacaggagaa
gtcatcgttcaaagctataacccagaacattacagtattgaattcgccaaaaaacatgat
ttcatcggtttttataaccacgaaatgcagctacgaaaaatgggttcctacccgccattt
tattacttaaccatgattaatgtcagcgatgaaaatgaaatgaaagcgattcgaaccatt
caagaaatggctcagtttttacgaggaaagctcggtccagatgccgtgattcttggccct
gttcctagcaccatcacgagaattaaaaacaaatatcgctaccagtgcattattaaatat
aaaatcgaaccaaacttaaaaaaagaactaaaaacactaattacccattatcaaaaagac
caacaaaaaggtttaacaataactattgacgtacagccttacgtactaatgtaa
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