Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_02247
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Entry
Lm4b_02247 CDS
T00898
Name
(GenBank) Putative 3'-to-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmc03019
]
Lm4b_02247
Messenger RNA biogenesis [BR:
lmc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Lm4b_02247
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
CAS06004
UniProt:
C1KXH5
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Position
complement(2313697..2314638)
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AA seq
313 aa
AA seq
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MEKRLLDFEVGETVDLFLLIKSSVKGTASNGKPFLSLVLQDKSGELEAKLWDVKESDEAN
YGVQQIVHLMGDIQNYRGRKQLKIRQIRQATALDGVSASEFMETAPINKEEMADEITQYI
FEMKNANLQRITRALLKKYQDDFYDYPAAMRHHHEFVSGLSFHVVSMLRLAKSVADLYPS
VNRDLLYAGVILHDLGKVIELSGPVSTTYTLEGNLIGHISIVVEEVSKIADELSIDGEEV
VVLKHVLLSHHGKGEWGSPKPPLVREAEILHQIDLMDASLNMMDKVLKHTKPGEFSERVF
GLDNRSFYNPIFE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaagattattagactttgaagttggggaaacagtagacttattcttgctaatt
aaatcaagcgtaaaaggaacggctagcaacggaaagcccttcttgagccttgtcttgcaa
gataaatcaggtgaattagaggcaaaactatgggatgttaaagaaagtgatgaagcgaat
tacggggtacaacaaatagttcatcttatgggtgatattcaaaattatcgtgggcgaaaa
caattgaaaatccgccaaattagacaagctacagcactggacggtgttagtgctagtgaa
ttcatggaaaccgcgccaattaataaagaagaaatggctgatgaaatcacacaatatatt
ttcgaaatgaaaaatgcgaatttgcaacgaattacgcgcgcattgcttaaaaaatatcaa
gatgatttttatgattatccggcggcaatgcgtcatcatcatgaatttgtttccggcttg
agttttcatgtagtttcgatgttacgacttgcaaaatcagttgccgatctttacccatct
gttaaccgagatttattatacgcaggtgtgattttacatgatttaggaaaagtcattgag
ctttcaggccctgtatcaacgacgtatacactagaaggtaatttaattggccatatttct
atcgtagtagaagaagtgagcaaaattgcggacgaactttcgattgatggtgaagaagtc
gtagttttaaaacacgttcttctatctcatcatggtaaaggtgagtgggggagtccaaaa
ccaccgcttgttcgagaagccgagattttacaccaaattgatttaatggatgcttccttg
aacatgatggataaagtactaaaacatacaaaacctggtgaattcagtgaacgagtattt
gggttagataatcgttcgttttataatcctatatttgaataa
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