Leisingera methylohalidivorans: METH_11025
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Entry
METH_11025 CDS
T02961
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lmd
Leisingera methylohalidivorans
Pathway
lmd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
METH_11025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmd03400
]
METH_11025
Enzymes [BR:
lmd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
METH_11025
DNA repair and recombination proteins [BR:
lmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
METH_11025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AHD01147
UniProt:
V9VW90
LinkDB
All DBs
Position
2111852..2112658
Genome browser
AA seq
268 aa
AA seq
DB search
MKIATFNINGIKARAKALPDWLDEAQPDVAVLQEIKSVDEAFPREMLEERGYNVETHGQK
SFNGVAILSKLPLEDVRRGLPGDDSDEQARWIEATVVGKQAIRICGLYLPNGNPVELEAD
GRPAAGGKYAYKLAWMERLKTRAQQLMDSEMPALMAGDYNIIPQAEDAKRPEAWLEDALF
RPESRAAFQRIVNLGFTEAFRARHQGPGHYSFWDYQAGAWNRDDGIRIDHFLLTPQAADL
LRDCQIDKDVRGREKPSDHVPVWVDLDI
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgccacatttaatatcaatggcatcaaggcccgggccaaggcgctgccggac
tggctggatgaggcccagcccgacgtggcggtgctgcaggagatcaaatcggtcgatgag
gcgtttccgcgcgaaatgctcgaagagcgcggctacaatgtcgaaacccacggccagaaa
agctttaacggcgtggcgatcctgtcaaagctgccgctggaggatgtgcgccgcgggttg
cccggcgatgacagcgacgaacaggcgcgctggattgaggcgacggtggtcggcaagcag
gcgatccgcatctgcggtctctatctgcccaacggcaacccggttgagctggaggcggac
ggccgcccggcggcgggcggtaaatatgcctataagctggcctggatggagcggctgaag
acgcgggcgcaacagctgatggacagcgagatgccggcgctgatggcgggcgactacaac
atcattccgcaggccgaagacgccaagcggcccgaagcctggctggaggacgcgctgttc
cgcccggaaagccgggccgcgtttcagcggattgtgaacctcggctttaccgaggcgttc
cgggcccggcaccagggaccggggcactattccttctgggattatcaggccggcgcgtgg
aaccgtgatgacggcatccgcatcgaccatttcctgctgacgccgcaggccgccgacctg
ttgcgcgactgccagatcgacaaggacgtgcgcggacgcgaaaaaccctcggaccacgtg
ccggtctgggtggatctggacatctga
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