Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293: LEUM_1976
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Entry
LEUM_1976 CDS
T00411
Name
(GenBank) ATP-dependent DNA helicase, RecQ-like protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lme
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Pathway
lme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LEUM_1976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lme03019
]
LEUM_1976
03400 DNA repair and recombination proteins [BR:
lme03400
]
LEUM_1976
Enzymes [BR:
lme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LEUM_1976
Messenger RNA biogenesis [BR:
lme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LEUM_1976
DNA repair and recombination proteins [BR:
lme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LEUM_1976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
PWP3A-B_C
Phage_portal
ArdA
Motif
Other DBs
NCBI-ProteinID:
ABJ63047
UniProt:
Q03US5
LinkDB
All DBs
Position
complement(1950157..1951965)
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AA seq
602 aa
AA seq
DB search
MQTANPQTILKEKFGYDNFRAGQLDVINKVLAHKHALAIMPTGGGKSITYQLPAMMFEGI
TLVISPLISLMKDQVDGLNTMGIPATFLNSTVDGQEQAQRMSDLRHGLYKMLYVAPERLE
VPSFFSFVQSLNIELIAVDEAHVLSQWGHDFRPSYLNILPLLEQISGHPAVLGLTATATE
RVRENLQQLLQVDDDDTVLTGFARDNLALNIVHNQDKRKYVVEYLQKNREQTGIIYAATR
KQVDELTTYLNKIGINAGRYHAGLSEKERQRQQEAFLYDENPVIVATNAFGMGINKPNVR
YVIHYSVPGNIEAYYQEIGRAGRDGLPAEAILLYAPQDMHLQEFFVQKSEGSEEHKQNEY
DKIREMNAFANTQTCLARYLLQYFGETVTEDCGHCSNCLDTREWVDVTVDAQKVLANVMR
MNQRFGKTMVAKVLKGSNDASVRKYEFLHDLPTFGLMKERTLKELTRFIDYLTAEGYLRF
EGAEFPVLKVTSLGAEVLKGEIEIKKRLEKVRIVSQKVTTDDLKLSDEDNRLFAKLKEKR
LELARAAGLPPFLIFSDKTLMSMAQARPQTDTEFLAISGVGEKKFEIYHNDFAKVINDFI
VV
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactgcgaatccacaaacaattttaaaagaaaaatttgggtacgataactttcga
gctggtcagctagatgttattaataaagtactcgcacataaacatgctttagctattatg
ccaactggtggtggaaaatcaattacctatcagctaccagcaatgatgtttgaaggcatt
accttagtcatttccccattaatttcgttaatgaaagaccaagttgacgggttgaacacc
atgggcattcctgcgacgttcttgaattcgacagttgatgggcaagaacaagcacaacgc
atgtcggacctaagacatgggctttacaaaatgttgtatgttgcgcctgaacgactagag
gtccctagcttttttagttttgttcaaagtctcaatattgagttaattgctgttgacgaa
gcccacgttttatcacaatggggacatgactttcgtccgagttatctgaatattctacct
ttgttggaacaaatttctggacatccagcagttcttggtttgacggccaccgcaacagag
cgtgttcgtgaaaacctacaacaattgttacaagtagacgatgatgatacggtcttgacc
ggctttgcgcgagataatctggctttgaatattgtacataatcaggacaaacgaaagtat
gtggttgaatatttacaaaaaaatcgtgaacaaactggtattatttatgcagcaacacgt
aagcaagttgatgaactgaccacttatttgaataaaataggcattaatgcaggtcgttac
catgctggattatctgaaaaggaacgtcaaagacagcaagaagcgtttctatatgatgaa
aatccagttattgtggctacaaacgcttttgggatgggtattaataaaccaaatgtgcgc
tacgtaatccattactccgtcccgggaaacattgaggcatattatcaggaaattggccgt
gcgggtcgtgatgggttacccgccgaagctatattattatatgcaccacaggatatgcat
ctgcaagaattctttgttcaaaagtcagaaggttcagaagaacacaagcaaaatgaatat
gacaaaattcgagaaatgaacgcttttgctaatacgcaaacttgcttagcacggtattta
ttgcaatacttcggtgaaacggtgacagaagattgtggtcattgctcgaattgtttggat
acgcgcgagtgggttgatgttacggtagatgcgcaaaaagtgctggctaatgtgatgcgt
atgaatcaacgctttggtaaaacgatggtcgctaaggttttaaaaggatcaaatgatgct
agtgtgcgtaagtatgagtttttacatgatttaccaacgtttggtttgatgaaagagcga
acgctaaaagagctgacgcgctttattgactacttaacggctgaaggatatttacgtttc
gagggagcagagtttcccgtgttaaaagtaacatcgttaggtgccgaagtattaaaaggt
gaaattgagattaaaaaacgtcttgagaaggtacgtattgtcagtcagaaagtgactact
gatgatttgaaactttccgacgaagataatcgtctgtttgcaaagttaaaggaaaaacgt
ttagaattagctcgggcagctggtttgccacctttcttaatattctcagacaaaacgtta
atgagtatggcacaggcgcgtccgcaaactgatacagagttcttagcgatctctggtgtg
ggtgaaaagaagtttgaaatttatcataatgattttgcaaaggttattaatgattttatt
gtagtttaa
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