Listeria monocytogenes HCC23 (serotype 4a): LMHCC_1089
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Entry
LMHCC_1089 CDS
T00801
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lmh
Listeria monocytogenes HCC23 (serotype 4a)
Pathway
lmh03030
DNA replication
lmh03430
Mismatch repair
lmh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMHCC_1089 (holA)
03430 Mismatch repair
LMHCC_1089 (holA)
03440 Homologous recombination
LMHCC_1089 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmh03032
]
LMHCC_1089 (holA)
03400 DNA repair and recombination proteins [BR:
lmh03400
]
LMHCC_1089 (holA)
Enzymes [BR:
lmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMHCC_1089 (holA)
DNA replication proteins [BR:
lmh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMHCC_1089 (holA)
DNA repair and recombination proteins [BR:
lmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMHCC_1089 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HTH_37
DUF1002
HTH_Crp_2
AAA_assoc_2
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
ACK39437
LinkDB
All DBs
Position
1125394..1126425
Genome browser
AA seq
343 aa
AA seq
DB search
MLPEWKQIRSKKITPVYLIIGTEDYIINETKQLLIDNILEGEEVEFNYANLDLEEMPIEV
VVQEAESMPFFGDKRLVMANNPLFLTTEKSKNKVEHDTAKLEAYLNEPVDYSVLCFVARV
EKLDERKKLTKLLKKTATVIEAKRPNENELKKWIEAKLSENNMQMSQEAITRLIELTSGQ
LTTAMNELQKLMLYCFDSKEITIQDVESLVVRSLEQNIFLLLDKMIAMDIGGALRIYYDL
LKQKEEPIKILALISSQFRLLNQLKVLEQQGYSQQQAATKLKVHPFRVKLASKQAKNFTE
LQLNQALKRLAEIDLEMKTGFGDKEQKLEWFLFELQDNRQKRV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgctgccagaatggaaacagatacgctccaaaaaaataacgccggtgtatttaatcatc
ggtacagaagattatattattaatgaaacgaaacaacttttaatagataatattttggaa
ggcgaagaagtagaatttaactatgccaatttagatttagaagaaatgcctatagaagtg
gtcgttcaagaagcagaaagtatgccttttttcggtgataaacgtttagtaatggctaat
aatccactttttttaacaacggaaaaaagtaaaaacaaagtggaacatgatactgcaaaa
ttagaggcttatctcaatgaaccagttgattattcagtattatgctttgtagcacgggta
gaaaagttagatgagcgtaaaaagcttactaagttactcaagaaaacagctaccgttata
gaagctaaacgacctaatgagaatgagttgaaaaaatggattgaagcaaaattaagcgag
aacaatatgcaaatgtcacaagaggctattactcgactgatagaattaactagtggtcag
ttaactacggccatgaatgaactgcaaaaattaatgctctattgtttcgattcaaaagaa
attaccattcaagatgtagagtctttagttgtccgctcactagaacaaaatattttcttg
ttgcttgataagatgattgcgatggatattggtggggcgcttcggatttattacgactta
ttaaaacaaaaagaagagcctattaagatactggcattaatttctagtcaattcaggttg
ttaaaccaattaaaggttttagaacaacaaggttactcccaacaacaagctgcgactaaa
ctaaaagtgcatccattccgtgttaagttagcatcaaaacaagcgaagaatttcacggaa
ttacaattaaatcaagctttaaaacgattagctgaaatcgacttggaaatgaaaactggc
tttggtgataaagaacagaaactcgaatggttcttattcgaattacaggataatcggcaa
aagagagtataa
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