Listeria monocytogenes HCC23 (serotype 4a): LMHCC_2928
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Entry
LMHCC_2928 CDS
T00801
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lmh
Listeria monocytogenes HCC23 (serotype 4a)
Pathway
lmh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMHCC_2928 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmh03021
]
LMHCC_2928 (rpoA)
03400 DNA repair and recombination proteins [BR:
lmh03400
]
LMHCC_2928 (rpoA)
Enzymes [BR:
lmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMHCC_2928 (rpoA)
Transcription machinery [BR:
lmh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LMHCC_2928 (rpoA)
DNA repair and recombination proteins [BR:
lmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LMHCC_2928 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF961
flgE_D3
Motif
Other DBs
NCBI-ProteinID:
ACK41259
UniProt:
B8DB34
LinkDB
All DBs
Position
2914261..2915205
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETIEISDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
ALHEFSVIEGVVEDVTTMILNIKKLALKIYSDEEKTLEIDMQGPGVVTAADINYDSDVEI
LNPDLHIATLSDNAKFHVRLNATRGRGYTPADQNKRENMPIGVLPVDSIFSPVIRVNYQV
ENTRVGQSTNYDKLTFDVLTDGSISPEEAVSLGAKILSEHLSIFVNLTDEAQKAEIMIEK
EESHKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELADKSEDDMMKVRNLGRKSLEEVK
VKLADLGLSLRNEN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaagccaaaaatcgagacgattgagatcagcgatgatgccaagtat
ggaaagtttgttgtagagccacttgagcgtggatatggtacaactttgggtaactcctta
cgtcgtattctattatcttctcttccaggtgcagcagtaacctctatccaaattgatgga
gctttacatgagttttctgtaattgaaggtgtagtagaagatgtaacaaccatgatttta
aatatcaaaaaacttgcgctaaaaatctattctgatgaagaaaaaacattagaaatcgat
atgcaaggtcctggtgtagtgactgcagctgacattaattatgacagcgatgttgagatt
ttaaatcccgacttacacattgctacattaagtgataatgctaaatttcatgtgcgttta
aatgcgactcgtggtcgtggttacacacctgctgatcaaaataaacgcgaaaatatgcca
attggtgtacttccagtcgattcaatcttttcaccggttatccgtgtgaactatcaagtg
gaaaatacacgtgttggacaatcaactaattatgataagcttacgtttgatgtgttgact
gacggaagtatcagcccagaagaagcagtttcacttggagctaaaattctttctgagcat
ttaagtatcttcgttaacttaacagatgaagcacaaaaagctgaaattatgattgaaaaa
gaagaaagccataaagagaaagtgcttgaaatgactattgaagaattagacttgtctgtt
cgttcatataattgtttgaaacgcgctggaatcaatacagtacaggaacttgctgacaaa
tccgaagacgatatgatgaaagtccgtaacttgggccgtaaatcgcttgaggaagttaaa
gtaaaactggctgaccttggcttatctctaagaaacgaaaactga
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