Leishmania mexicana: LMXM_24_0760
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Entry
LMXM_24_0760 CDS
T02288
Name
(RefSeq) DNA repair and recombination protein RAD54,putative
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
lmi
Leishmania mexicana
Pathway
lmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMXM_24_0760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmi03400
]
LMXM_24_0760
DNA repair and recombination proteins [BR:
lmi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
LMXM_24_0760
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
13454458
NCBI-ProteinID:
XP_003875888
UniProt:
E9AWR6
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All DBs
Position
24:265797..269189
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AA seq
1130 aa
AA seq
DB search
MRKSAAGSGFANGTFRPPTTSGEDKPAERKLSTHPLLPATLAAAVPRFMTGWRALSNASF
KAPGSGDASHISDDPVDLPGPTVTCVTSTGARREVMYPTVTPHSVGSTAHNDLLAYRLAR
RSQIDYHQPESAAKAMAARALQAAAAARGKTDEDSEGSGSQGGDTAKMLKVEAGTGGVKA
APGASGPAAGDTAAAASEGHETAAAANEDAIPADKVVSRYPVSPYGKLYFQVETDGATRH
ESVGIVIIDTELLGVMMYDRVGRQYGNRPDPGYPIKQEEVDNAKAGSVLKVGTKNVLLIT
ALTEEAFRSGEFFLRSEHDLRVKEDKAKAKAEAVAAEEAKARKPGMSFGNSLSNSSAFAS
ILFRRRPKDGETGFVVPVAGRPKMGKNGIIMDELQPLHDPDREKAVVLFRADYKRDVHGR
RQVSVVVDPIIGDKLRPHQIIGVKFLFDCITGERMLGYHGAILADEMGLGKTIQTVATIY
TCLKQGKHGHPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVRHFAISESTPKGDRIISRF
DGDGDVLVISYDQLRKYIDRLSGLRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRVIL
SGTPIQNDLSEFHAMVNFVNPGILGNRDLFARVFEEPVSLGRDPECPDHLKSLGRDRAHY
LSMLTQRFILRRTQSINESYLPPKVDVTVFVRLGEKQELAYQKLADVVESAECTPLVLIS
ALRKLCNHMDLFHDAVHLSHQIGNSAGASAQQQQQQQQQQQAGRRRGRSSAAGESKGIPL
SVLPKGFKPGSLNMDCGSKMHFVSLVLDELKRNGEHDKLVIVSNFTQTLDIIAALCNSKQ
IAYFQLDGSTPIKKRQQLVDYFNVPGSQEVVFLLSSKAGGVGLNLIGANRLILFDPDWNP
ANDAQAMGRVWRDGQKKRVFIYRLLSTGTIEEKIYQRQVSKQGLSANVVDMQEDSKQHFT
LEELKSLFKYKADTLCDTHDLLGCTSCEAVESLTASSRGKQAEELKMQFRKVGQPKKKSG
PRMDELKAWRHISAVDSFNLDSVTRAVAQHAPFLLSFLFADERDNTKMAGPVVSTRVKVD
KPAFEEDEETITCASQAAMQQQESEMEIEVIDSDDDEEEAELESSEEVSD
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagtcagcggcaggtagcggctttgccaacggcacgttccgccctcccacaacg
agtggtgaggataagccggcggagcgcaagctcagcacgcacccactactgcctgccacc
ttggctgccgccgttccgcgcttcatgaccggttggcgggccctcagcaacgccagcttc
aaggcacccggctcaggggatgccagccacatcagtgacgaccccgtggatctgcctggc
ccaactgtgacctgtgtcacctccactggcgctcggcgcgaggtgatgtaccccaccgtt
accccacacagcgtgggcagtacagcacacaatgaccttctggcttaccggctggcacgg
cgcagccagatagactaccaccagccggagtccgccgccaaagcgatggccgcgcgggcc
ctccaagctgccgcggcagcgcgagggaagacggacgaggactctgagggcagcgggagc
cagggaggcgacactgcaaagatgctaaaggtggaggccggcactggaggcgtgaaggcg
gctcctggtgcatcagggcctgccgcaggtgacactgccgcggcagccagcgagggccat
gagaccgccgccgccgcgaacgaggacgctatcccagcggacaaggtggtgagccgctac
cccgtcagcccctatggcaagctgtacttccaggtcgagacggacggtgctacgcggcat
gaatctgtcggcatcgtcatcatcgatacagagttgctgggggttatgatgtacgaccgc
gtggggcggcagtacggcaaccggcccgaccccggctacccgatcaagcaggaggaagtg
gacaatgccaaggcgggcagcgtcttgaaggtgggcacaaagaatgtgctgctcatcacg
gcgctcaccgaggaggcgttccgcagcggcgagttcttcttgcgctccgagcatgacctc
cgcgtgaaggaggacaaggccaaggccaaggccgaggccgtggccgccgaggaggcaaag
gcgcggaagcccgggatgagcttcggcaactcgctcagcaacagcagcgccttcgcctcc
atcctattccgccgccgccccaaggatggggagacgggcttcgtcgtccccgtagccggg
cgtccaaagatgggcaagaacggcatcatcatggacgagctgcaaccgctgcacgacccg
gaccgcgagaaggcggtggtgctgttccgcgccgactacaagcgcgacgtgcacggccgt
cggcaagtctccgtcgttgtggacccgataattggcgacaagctgcggccgcaccaaatc
attggtgtaaagtttctcttcgactgcatcacgggcgagcgcatgctcggctaccacggc
gccatcttggccgatgagatgggcttgggtaagacgatccagacggtggccaccatctac
acctgtttgaagcaaggcaagcacggccacccgacggcccgcaagtgcctcgtcgtgacg
ccgtcttcgctggtgaagaactggtgcaacgagttcgacaaatggctgggcgaaggggca
gtgaggcatttcgccatctccgagtcgactccgaagggggaccgcattatttcccgcttc
gacggcgatggcgacgtcctcgtcatctcgtacgaccagctgcgcaagtatatcgaccgc
ctctcggggctgcgctctgtcgaactggtcgtctgcgacgagggccaccgcctcaagaac
gcggaggtgaagacgacaaaggcggtggacatgctgccgacgcgcaaccgcgtcattctc
tccggtacccccatccagaacgacctctccgagttccacgccatggtcaacttcgtcaac
cccggcatcctcggcaaccgtgacctcttcgcacgcgtcttcgaggagcccgtctccctt
ggccgtgacccggaatgcccagaccacctcaaatctcttggccgcgatcgcgcgcattac
ctctcgatgctgacgcagcgctttatccttcgccgcacgcagtccatcaatgagtcctac
ctgccgcccaaggtggacgtcaccgtcttcgtgcggctgggagagaagcaggagctcgcc
tatcagaagctggccgacgtggtcgagtctgcggagtgcacgccgctggtgcttatctcc
gccctgcggaagctgtgcaaccacatggacctcttccacgacgcggtgcatctgtctcat
caaattggcaactcggcaggtgcgtcggcgcagcagcagcagcagcagcaacagcaacag
caggctgggcgccgtcgcggccgcagcagcgctgcaggtgaatcgaaaggcatccccctc
tctgtactaccgaaggggtttaagccgggtagcttgaacatggactgcggcagcaagatg
cactttgtctccctcgtgctcgacgagctgaagcgaaacggcgagcacgacaagctcgtc
attgtgtcgaacttcacgcaaacactcgacatcattgcggcgctgtgtaactcgaagcag
atcgcgtacttccagcttgatggcagcacgcctatcaagaagcgccagcagctggtggac
tacttcaacgtgcccggctcgcaggaggtcgtgtttctgctctcctcgaaggccggcggt
gtcgggctgaacctgatcggtgcgaaccggctgatcctcttcgaccctgactggaacccc
gcaaacgatgcacaggcgatgggccgcgtgtggcgtgatggccagaagaagcgcgtcttc
atctaccgcctgctcagcaccggcaccatcgaagagaaaatctaccagcggcaagtgagc
aagcaaggcttgtcggcgaacgtggtggatatgcaggaggattcgaagcagcacttcaca
ctggaggagctcaagtccctcttcaaatacaaggccgacacgctgtgcgacacccacgac
ctgctgggctgcacatcctgcgaggccgtcgagtccttgaccgcgagcagccgcggcaag
caagcagaggagctcaagatgcagttccgcaaggtgggccagccaaagaagaagagtggg
ccacgcatggatgagttgaaggcgtggcgccacatcagcgccgttgactctttcaacctt
gacagcgttacccgcgccgtggcgcagcacgcgccattcctcctatcctttctcttcgct
gacgagcgcgataacaccaagatggccgggcccgtggtgtcgacccgcgtgaaggtcgac
aagcccgcctttgaggaggacgaggaaacgatcacgtgtgccagccaagccgccatgcag
cagcaggagagcgagatggagatcgaggtgatcgacagcgacgatgacgaggaagaggcg
gagctcgaatcgtccgaagaggtcagtgattag
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