Leishmania mexicana: LMXM_28_1820
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Entry
LMXM_28_1820 CDS
T02288
Name
(RefSeq) putative replication factor A, 51kDa subunit
KO
K07466
replication factor A1
Organism
lmi
Leishmania mexicana
Pathway
lmi03030
DNA replication
lmi03420
Nucleotide excision repair
lmi03430
Mismatch repair
lmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMXM_28_1820
03420 Nucleotide excision repair
LMXM_28_1820
03430 Mismatch repair
LMXM_28_1820
03440 Homologous recombination
LMXM_28_1820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmi03000
]
LMXM_28_1820
03032 DNA replication proteins [BR:
lmi03032
]
LMXM_28_1820
03400 DNA repair and recombination proteins [BR:
lmi03400
]
LMXM_28_1820
Transcription factors [BR:
lmi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
LMXM_28_1820
DNA replication proteins [BR:
lmi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
LMXM_28_1820
DNA repair and recombination proteins [BR:
lmi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
LMXM_28_1820
MMR (mismatch excision repair)
LMXM_28_1820
DSBR (double strand breaks repair)
HR (homologous recombination)
LMXM_28_1820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
zinc_ribbon_15
zinc-ribbons_6
tRNA_anti_2
DZR
Motif
Other DBs
NCBI-GeneID:
13450726
NCBI-ProteinID:
XP_003877023
UniProt:
E9B001
LinkDB
All DBs
Position
28:complement(692672..694075)
Genome browser
AA seq
467 aa
AA seq
DB search
MQQPGSHQIQPIDSLTPFLGGKWWIRARVTDKTDVRTWNKPTSQGKLFSFTLIDESAAIR
ATVFNDAVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTS
TAALPMQRYNFVPIELLKQREVGSLVDVLGVVLKVDEVSSITQKSTGRELVKRNVKMGDM
TAAVEVTFWNDEAKAWCYPVGTVVALRQLKVGSFDGVTLSSTYQTKIDINPTDLPDVKKL
ATWYVTTGGANVMSLSSQGLGAASGAGGESDRGRKYLDEIQSDGIGRGLKPEYVDVRCVP
IYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQRYLVSIQVTDNVSQAWL
TLFNEAGIEFFGMEAAELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEETSSNAMTGEE
SDRLRMSVVRISEFMPIAGTSEETRRRLAQNLRTECDEILRLIEAYV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagccgggcagccaccagatccagcccatcgactccctcacaccgtttctcggc
ggcaagtggtggattcgggcccgtgtgacggacaagacggacgtccgtacctggaacaag
ccgacgtcgcagggaaagcttttctcctttaccctcattgacgagtcggccgcgattcgg
gcaacggttttcaatgacgccgtcgacaccttcgagccgctcatcgtcaacggacaggtg
tactacttcagcggtggccaggtgaagaatgcgaaccggcgtttcagcaacgtgaacaac
gactacgagctcacgtttgaccgcagctcggagattatgctggcgcggcaggacacatcg
acagcggcgctgccgatgcagcgctacaactttgtgccgatcgaacttctgaagcagcgc
gaggtcggctcgctcgtcgatgtgctcggcgttgtgctcaaggtagacgaagtgtcgtcc
atcacgcaaaagtcgacgggccgagagctcgtgaagcgaaacgtcaagatgggcgacatg
acggcggccgtggaggtcaccttctggaatgacgaggcaaaggcgtggtgctacccggtc
ggcaccgttgtggcgctgcggcagctgaaggtcggcagtttcgacggtgttaccctctca
tccacctatcagactaagattgacatcaacccgacagacctgccggatgtcaagaaactc
gcaacgtggtatgtgacgactggcggcgcgaatgtgatgtccttgtcgtcgcaggggctt
ggcgcggcgagcggggccggtggcgagagcgaccgcggccgcaagtatctggacgagatc
cagtcggatgggatcggccggggcctgaagcccgagtacgtcgacgtccgatgcgtcccg
atttacttcaagcaggacgcccagtggtacgacgcgtgcccgacctgcaataaaaaggtg
accgaggagggtgcgcagggcgaccgctttcgctgcgagaagtgcgacaagaccgtcacg
ccgacgcagcgctaccttgtctccatccaggtcacggacaacgtctctcaggcgtggcta
acgctcttcaacgaagccggcatcgagttcttcgggatggaggcggcagagctgaagcgt
cgtgcgcaggaggaccctctctacatcgcgaagctggcgcagggccgcatgaaccgacca
gtggtgatgcgtctgcgcgtgaaggaggagacgagctcgaacgccatgaccggcgaggag
tcagaccggctgcgcatgtcagtggtgcgcatctccgagttcatgccgattgcgggcacc
tccgaggagacgcgtcgccgcctcgcgcagaacctgcgcacagagtgcgatgaaattctc
cgcctcatcgaggcttacgtgtga
DBGET
integrated database retrieval system
