Leuconostoc mesenteroides subsp. mesenteroides J18: MI1_02350
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Entry
MI1_02350 CDS
T01768
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lmm
Leuconostoc mesenteroides subsp. mesenteroides J18
Pathway
lmm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MI1_02350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmm03400
]
MI1_02350
Enzymes [BR:
lmm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MI1_02350
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MI1_02350
DNA repair and recombination proteins [BR:
lmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MI1_02350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AET29930
LinkDB
All DBs
Position
487878..488711
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AA seq
277 aa
AA seq
DB search
MPELPEVETVRRGLEKLIIGSKIIDVQLPYPKVITGDGQQFITGVMNTEFKQIDRRGKYL
LLRLANNHTIVSHLRMEGQYSVESLETVPYKHTEIVFELSDKRALFYNDTRRFGRMALTT
TGFENTEVPSLSKLGPEPTEEQLTLSYMKAIFSKSRRPVKTFLLDQTQIAGIGNIYADEV
LWQSKIHPKTPANVLDEVQLSVLRANIISEIKRAIKHHGTTVHSFSNVFGEVGKFQNELQ
AYGHAGEPCLRCNTPMVKIKVGQRGTTFCPFCQVEKD
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactaccagaagttgaaacagtcagacgtgggcttgaaaaactaattattggc
agcaaaattattgatgtacagctaccttacccaaaagttattactggtgatgggcagcag
tttatcaccggtgtcatgaacacagaatttaaacaaattgatcgtcgtggtaaatattta
ttactacgtttagcgaataatcatacgattgtttcgcacttacgaatggaagggcaatat
tcagtagagtcccttgagacggtcccttataaacatacagagattgtctttgaattatct
gataagcgagctttgttttacaatgacacgagacgctttgggcgcatggcgttgaccaca
actggttttgaaaacacagaagtgccttcgttgtccaaattaggaccagaaccgacagag
gagcagctgactttatcttatatgaaggccattttttcaaagtctagaaggcctgttaaa
acttttttattggatcaaacacaaatagctggtattggtaatatttatgctgatgaggtt
ctgtggcaaagcaaaattcatcccaaaacgccggccaatgtactagatgaagttcaactg
agtgttcttagagcaaacatcatttcagaaattaaacgagcgattaagcatcatggtaca
acagtgcatagttttagtaatgtttttggtgaggtgggcaagtttcaaaatgaattacag
gcttatgggcatgctggcgaaccatgtttacgttgcaatacgccaatggttaaaataaaa
gttggtcaacgtggcacgacattttgtccattttgtcaagtggagaaggattaa
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