Listeria monocytogenes ATCC 19117 (serotype 4d): LMOATCC19117_2498
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Entry
LMOATCC19117_2498 CDS
T02239
Symbol
uvrB
Name
(GenBank) excinuclease ABC, subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lmoa
Listeria monocytogenes ATCC 19117 (serotype 4d)
Pathway
lmoa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lmoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LMOATCC19117_2498 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmoa03400
]
LMOATCC19117_2498 (uvrB)
DNA repair and recombination proteins [BR:
lmoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMOATCC19117_2498 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LMOATCC19117_2498 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
P-loop_SecA
AAA
HEM4
UB2H
AAA_7
DUF5662
AAA_19
AAA_30
AAA_22
DUF87
AAA_5
Motif
Other DBs
NCBI-ProteinID:
CBY71397
LinkDB
All DBs
Position
complement(2580722..2582698)
Genome browser
AA seq
658 aa
AA seq
DB search
MKDKFELVSKYSPQGDQPRAIEQLVAGLKKGLKHQTLLGATGTGKTFTVSNVIQEVNKPT
LVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQSDTYIEKDASINDEID
KLRHSATAALFERRDVIIIASVSCIYGLGSPIEYGEMLVSLRVGMEISRDQLLRKLVDIQ
YDRNDIDFQRGRFRVRGDVVEIFPASRDEHCMRIEFFGDEIERIREVDALTGEIIGEREH
VSIFPASHFVTRPDIMKKAIVNIKAELEDRLQVLRADNKLLEAQRLEQRTNYDLEMMEEM
GYCSGIENYSRHLSLRPAGVTPYTLLDYFPDDFQMVIDESHVTMPQIRGMFNGDQARKQM
LVDHGFRLPSALDNRPLRLEEFEKHINQIMFISATPGPYELEKNPDVIEQIIRPTGLLDP
IVEIRPIQGQIDDLMDEINDRVEKNERVLITTLTKKMSEDLTNYLKEAGVKVQYLHSEVK
TLERIEIIRDLRLGVYDVIVGINLLREGIDLPEVSLVAILDADKEGFLRSERSLIQTMGR
AARNENGRVIMYADKMTDSMRNSIGETERRRKIQIEYNEKHGITPKTIKKEIRGIIAATS
AADEREAVKQHDLSKMSKKERDVFIEGMEHEMKEAAKALDFERAAELRDALLEIKAEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggataaatttgagttagtttctaagtatagcccacaaggagaccaacctagagcg
atagaacaattagttgcgggattaaaaaaaggcttgaaacaccaaactttacttggtgca
accggtacagggaaaacttttaccgtatccaacgtgattcaggaagtaaataagccaaca
cttgtcatggcccacaataagacgttagcgggacagctgtatagcgagtttaaagaattt
ttcccaaataatgctgtagaatattttgtcagttactatgattactatcaaccagaagcc
tatgttccgcaaagcgacacgtatatcgaaaaagatgcaagtatcaatgatgaaattgat
aagcttcgtcactctgctaccgctgcgctttttgaacgtcgtgatgtaattatcattgcg
agtgtatcgtgtatttatggcttaggttcgccgattgaatatggagagatgctcgtttcg
cttcgtgttggtatggaaattagccgtgatcagctactgcgtaaattagtagacattcaa
tatgatcgaaatgatatagattttcaacgtgggcgcttccgtgttcgcggcgatgttgtc
gaaattttcccggcatcaagagacgagcactgcatgaggattgaatttttcggtgatgaa
attgaacgtattagagaggtagatgcacttactggcgaaattattggagaaagagaacat
gtttccattttcccggcatctcactttgttaccagacctgatattatgaaaaaagcaatt
gttaatataaaagcggaactcgaagaccgccttcaagttttacgtgcagataataaatta
ctcgaagcacaacgtcttgaacaacggacgaattatgatttagaaatgatggaagaaatg
ggttattgctctggtattgagaactattctagacatttatcccttcgtccagcgggagtt
acaccatacacgttactcgattacttcccagacgatttccaaatggtaattgatgagtca
cacgttacgatgccacaaatccgtggtatgtttaacggtgaccaagccagaaaacaaatg
ctagttgatcatggttttagactaccaagtgctttagataaccgtccgctaagattagaa
gaatttgaaaaacatatcaatcaaattatgttcatttccgccacaccaggcccttatgaa
ctagaaaaaaatccggatgtcattgaacaaatcatccgaccaaccggcttgctagatcca
atcgtagaaattcgcccgattcaaggacaaatcgatgacttaatggatgagattaatgat
cgtgtcgagaaaaacgaacgtgttttaatcaccactttaacgaaaaaaatgtcagaggat
ttgaccaattatctcaaagaagctggtgttaaagtacaatatctccactcggaagtgaag
acgttagagcgaatcgaaatcattcgcgacctccgacttggtgtgtatgatgttatcgtt
ggaattaatttacttcgcgaaggaatcgatttacctgaagtatctcttgtcgctatttta
gatgcggacaaagaaggattccttcgttccgagcgttccttaattcaaacaatgggtcga
gccgctcgtaatgaaaacggtcgagtaatcatgtatgctgataaaatgaccgattcgatg
cgcaattctattggcgaaacagaacgccgtcgtaaaatccaaattgaatataatgaaaaa
catggcattacgccaaaaacaatcaaaaaagaaattcgtggtatcatcgcagcgacttct
gccgcagatgaaagagaagcagtgaagcaacatgatttaagcaaaatgtctaagaaagaa
cgcgatgtgttcattgaaggtatggaacatgaaatgaaagaagcagccaaagcacttgat
ttcgaacgtgctgctgaacttcgcgatgctttactggaaataaaagcggaaggatga
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