Listeria monocytogenes SLCC2376 (serotype 4c): LMOSLCC2376_1285
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Entry
LMOSLCC2376_1285 CDS
T02222
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lmon
Listeria monocytogenes SLCC2376 (serotype 4c)
Pathway
lmon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMOSLCC2376_1285 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmon03019
]
LMOSLCC2376_1285 (pnp)
03016 Transfer RNA biogenesis [BR:
lmon03016
]
LMOSLCC2376_1285 (pnp)
Enzymes [BR:
lmon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LMOSLCC2376_1285 (pnp)
Messenger RNA biogenesis [BR:
lmon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LMOSLCC2376_1285 (pnp)
Transfer RNA biogenesis [BR:
lmon03016
]
Prokaryotic type
tRNA degradation factors
LMOSLCC2376_1285 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
RNase_II_C_S1
S1_2
CvfB_2nd
SPATA25
RICTOR_M
DUF1773
Motif
Other DBs
NCBI-ProteinID:
CBY63317
LinkDB
All DBs
Position
1307341..1309512
Genome browser
AA seq
723 aa
AA seq
DB search
MSEKQVFSTEWAGKTLSVEVGQLAKQASGAALIRYGDTVVLTAAVGSKKPRPGDFFPLTV
NYEEKMYSVGKVPGGFLKREGRPSDRATLTARLIDRPIRPLFAEGFRNEVQITSTVFSVD
QDCSPEMAAMLGSSVALVISDIPFEGPIAGVDVGRIDGKYVINPTIEQAEKSDISLTVAG
TYDAINMVEAGAKEVSEEAMLEAIMFGHEEIKRLCEFQQQIIAAVGKEKREIELFVSDPE
LEAEVKAASEGKMKAAIKTEEKKAREAAIEEVKEEILESYKAKELENEAEILGEVAHILE
MIEKDEMRRLISQDKIRPDGRKVNEIRPLSSEVGMLPRVHGSGLFTRGQTQALSVCTLAP
LREHQIIDGLGTEEYKRFMHHYNFPQFSVGETGPRRAPGRREIGHGALGERALQYVIPSE
EEFPYTIRLVSEVLESNGSSSQASICGSTLAMLDAGVPIKAPVAGIAMGLVKLGDDYTIL
SDIQGMEDHFGDMDFKVAGTKDGITALQMDIKIDGLSRQILDEALTQAKEGRLHILEHLT
STISAPREELSAYAPKIITLNIKPEKIKDVIGPGGKQINAIIDETGVKIDIEQDGTVYIA
SQDQAMNRKAIAIIEDIVREVEVGEVYTGKVRRIEKFGAFVELFKGTDGLVHISELAHER
VGKVEDILKLGDEVTVKVIEVDQQGRVNLSRKALLEKKEQPEGDKKPQAEKKFYPKTKKT
ESK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaacaagtgttttcaacagaatgggcaggtaaaacattatctgttgaagta
ggtcaattagcaaaacaagcaagtggagcagcattaattcgttacggagatacggtcgtt
ttaacagcggcagtaggttctaaaaaaccacgtccaggcgactttttcccactaacagtt
aactatgaagaaaaaatgtattctgttggtaaagttcccggtggattcttaaaacgtgaa
ggacgtccaagtgaccgtgcaacattaacagcgcgcctaattgaccgtccaatccgtcca
ttatttgcagaaggtttccgtaatgaagttcaaattacatctactgtattcagtgtggat
caagattgttctccagaaatggcagcaatgcttggctcttctgtagcattagttatttct
gatattccatttgaaggaccaatcgctggtgtagatgttggccgtattgacggaaaatac
gttatcaacccaactatcgaacaagcagaaaaaagtgatattagcttaactgttgcagga
acttatgatgcaatcaacatggtagaagctggagcaaaagaagtttcagaagaagcaatg
cttgaagcaatcatgtttggtcacgaagaaattaaacgtctttgtgaattccaacaacaa
attatcgctgcagttggtaaagaaaaacgcgaaatcgaacttttcgtaagcgatcctgaa
cttgaagcagaagtaaaagcagcaagtgaaggtaaaatgaaagcagctatcaaaacagaa
gagaaaaaagcacgtgaagctgctattgaagaagtaaaagaagaaattttagaaagctat
aaagcaaaagaattagaaaatgaagcagaaattcttggtgaagtagctcatattcttgaa
atgattgaaaaagacgaaatgcgtcgtttaatttctcaagataaaatccgtccagatggt
cgtaaagtaaacgaaattcgtccactttcttctgaagttggtatgcttcctcgtgtccat
ggctctggtttattcactcgtggccaaacacaagctctaagtgtatgtacactggcaccg
cttcgtgaacaccaaatcattgatggtttagggacagaagaatacaaacgttttatgcat
cattataacttcccgcaatttagtgttggggaaacaggtcctcgtcgtgctccaggccgt
cgtgaaatcggtcatggtgcgttaggtgaacgtgcgttacaatatgttattccttccgaa
gaggaattcccgtacacaatccgtctagtatcagaagtgcttgaatcaaacggatctagt
tctcaagcaagtatttgtggttctacacttgcaatgcttgatgctggtgttccaattaaa
gcgccagttgcaggtatcgcaatgggtcttgtaaaacttggcgatgattacacaattctt
tctgatatccaaggtatggaagatcactttggcgatatggactttaaagttgctggaaca
aaagatggtatcacagcacttcaaatggacatcaaaattgatggcctaagccgccaaatt
ttggacgaagcattaacacaagcaaaagaaggacgcctacacattctagaacacttaact
agcactattagcgcgccacgtgaagaactttctgcttatgctccaaaaattattacactt
aacatcaaacctgagaaaatcaaagatgttatcggacctggtggaaaacaaatcaatgca
attattgatgaaactggcgtaaaaattgatatcgaacaagatggtacagtatatattgct
tcccaagatcaagcgatgaaccgtaaagcaattgctatcatcgaagacatcgttcgtgaa
gtagaagtgggagaagtttacactggtaaagttcgtcgtatcgaaaaatttggcgcattt
gttgaattattcaaaggtacagatggcttagttcacatttctgaattagcacatgaacgt
gttggtaaagtagaagatatcctaaaactaggtgatgaagttactgttaaagttatcgaa
gtagaccaacaaggtcgcgttaacttatcacgtaaagctttgcttgagaaaaaagaacaa
ccagaaggcgataaaaaaccacaagcagagaaaaaattctatcctaaaacgaaaaaaaca
gaatctaaataa
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