Listeria monocytogenes SLCC7179 (serotype 3a): LMOSLCC7179_1245
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Entry
LMOSLCC7179_1245 CDS
T02224
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lmos
Listeria monocytogenes SLCC7179 (serotype 3a)
Brite
KEGG Orthology (KO) [BR:
lmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmos03032
]
LMOSLCC7179_1245 (topA)
03400 DNA repair and recombination proteins [BR:
lmos03400
]
LMOSLCC7179_1245 (topA)
Enzymes [BR:
lmos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LMOSLCC7179_1245 (topA)
DNA replication proteins [BR:
lmos03032
]
Prokaryotic type
DNA Topoisomerases
LMOSLCC7179_1245 (topA)
DNA repair and recombination proteins [BR:
lmos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LMOSLCC7179_1245 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Toprim_4
JHBP
DUF2996
Toprim_2
Toprim_3
zinc_ribbon_4
Lar_restr_allev
HypA
Motif
Other DBs
NCBI-ProteinID:
CBY60451
LinkDB
All DBs
Position
1244472..1246550
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIEKYLGKKFKVKASMGHVRDLPKSQMGVDTENDYEPRYITIRGK
GPVLKELKQAAKKAKKVYLAADPDREGEAIAWHLANSLELDQSDKLRVVFNEITKEAVKE
SFKTPRKIDMDLVNAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSIALRIIIDREK
EINNFKPEEYWTIDGNFLKGKKKFQANFYGLNGKKKKLSTADDVKEVMSAIKGKSFDVTD
VTKKERLRNPAAPFTTSSLQQEAARKLNYRTRKTMMLAQQLYEGITLGKQGTVGLITYMR
TDSTRIADSAILEASNYIKETYGPEFSRNHKRSDKNAKGAQDAHEAIRPTSAMRSPQEVK
EYLTRDQLRLYRLIWERFIASQMTPAVLDTMRVDLDNNGVNFRANGSKIKFHGFMKVYVE
SNDDNTEEKENILPDLKKGDKVQSESLEQRQHFTQPPPRYTEARLVKTLEEIGIGRPSTY
SPTLDTIQRRNYVSLTNKRFIPTELGEIVNEMIEEYFPEILDVKFTANMESELDEVEHGE
VEWVKVIDEFYKRFEPNVIKADAEMEKIEIKDEPAGIDCDLCGAPMVYKMGKYGKFLACS
RFPDCRNTKAIVKEIGVTCPKCEKGHVIERKSKKKRIFYGCDRYPDCDYVSWDKPVERAC
PKCEKRALVEKKLKKGVQVQCTNCDYKESTQQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtgattgtagagtcacctgcaaaagcaaaaacgattgagaagtat
ttaggcaagaaatttaaagttaaagcttccatgggacatgttcgtgacttaccgaagagt
caaatgggtgtagacacagaaaatgactatgaacctcgttatattacgattcgcggaaaa
ggccctgttttaaaagaattaaaacaagctgccaaaaaagcgaaaaaagtctatctcgca
gccgatccagatcgtgaaggggaagcaattgcatggcacttagctaacagtttagagtta
gatcaatcagacaaattacgtgtagtatttaacgaaataacgaaagaagcagtaaaagaa
tctttcaaaacaccacgtaaaattgacatggatttagtcaatgcacagcaagcgcgtaga
attttagaccgtttagttggatataatatcagccctatcctatggaaaaaagtaaaaaaa
ggtttgagtgctggtcgtgttcaatctattgcacttcgaatcattattgatagagagaaa
gaaatcaataatttcaaacccgaagaatactggacaattgacggtaacttccttaaaggt
aagaaaaaattccaagccaatttttatggtctaaatggcaaaaagaaaaaactttctact
gcggatgatgtaaaagaagtaatgtctgcaatcaaagggaaatcatttgacgtaacagat
gtaactaaaaaagaacgacttagaaaccctgctgcaccatttaccacctcaagtttgcaa
caagaagcagcacggaaactaaattaccgtacaagaaaaacaatgatgcttgctcaacaa
ttatatgaagggatcacacttggcaaacaaggcacagttggtttaatcacttatatgcgt
accgactccactcgtattgcagattccgctatactagaagcaagtaactacattaaagaa
acttatggacctgaattttctcgtaatcataaacgatcagataaaaacgcaaaaggtgct
caagatgcccatgaagcaatcagacctacaagtgcaatgagaagtcctcaagaagtaaaa
gaatatttaactcgtgaccaacttcgcttatatcggctgatttgggaaagattcattgct
agccaaatgacaccagcagttcttgatacaatgcgcgttgacttagataacaatggcgtg
aatttcagagcgaatggctcgaaaattaaattccacggctttatgaaagtctatgtagaa
agtaacgatgataatacggaagaaaaagaaaatattctaccggatttgaaaaaaggagat
aaggtgcagtccgaatcactcgaacagcggcaacatttcacgcagccacctccacgttat
accgaagctagattagtaaagacgctagaagaaattggtattggccgtccttcgacttat
tcgccaacgcttgatacaattcaacgcagaaattatgtttccttaacaaataaacgattt
atcccaactgaattaggtgaaatagtcaatgaaatgattgaagagtatttcccagagatt
ttagatgtgaagttcaccgccaacatggaaagtgagctagatgaagtagagcacggagaa
gtcgaatgggtgaaagtcattgatgaattttataaacgatttgagccaaatgtcattaaa
gcagatgctgaaatggaaaaaatcgagattaaagatgaaccagctggcattgactgcgac
ctttgcggagccccaatggtatacaaaatgggtaaatatggtaagtttcttgcttgcagt
agatttccggattgtcggaatacaaaagcaatcgttaaagaaatcggtgttacttgtcca
aaatgtgagaaaggacatgtaatagaaagaaaaagtaagaaaaaacgtattttctacggt
tgtgatcgttatccagattgtgactatgtatcttgggataaaccagtcgaacgtgcttgt
ccgaaatgtgagaaacgagcactagtcgagaagaaattgaaaaaaggtgtacaagtacaa
tgtacaaattgtgattacaaagaatcaacccaacaataa
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