Listeria monocytogenes SLCC2540 (serotype 3b): LMOSLCC2540_1370
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Entry
LMOSLCC2540_1370 CDS
T02242
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha chain, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lmot
Listeria monocytogenes SLCC2540 (serotype 3b)
Pathway
lmot03030
DNA replication
lmot03430
Mismatch repair
lmot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMOSLCC2540_1370 (polC)
03430 Mismatch repair
LMOSLCC2540_1370 (polC)
03440 Homologous recombination
LMOSLCC2540_1370 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmot03032
]
LMOSLCC2540_1370 (polC)
03400 DNA repair and recombination proteins [BR:
lmot03400
]
LMOSLCC2540_1370 (polC)
Enzymes [BR:
lmot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMOSLCC2540_1370 (polC)
DNA replication proteins [BR:
lmot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMOSLCC2540_1370 (polC)
DNA repair and recombination proteins [BR:
lmot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMOSLCC2540_1370 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
Rv2179c-like
DEDDh_C
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
CBY76011
LinkDB
All DBs
Position
1356087..1360511
Genome browser
AA seq
1474 aa
AA seq
DB search
MPDETSLVPIKTGYEGHLAFINLNEGVLFGMTAKEEEKQERFQLLMTQIGLQDVTTYEEF
TKDAKIEKLVADKKNKTWQFHLHVPQIFPAALFHMMDVGMKRAFSQIAETEMQIVPENQT
IDETLIQDYWNLIVEPIGKQSPMIGKLLMEQKPTFKEPHFIEVAVHNDMEEATIQQRFQT
KIIESYGKAGFPRLAMKMHLLDQSETEEYKAFALAKQEEDQKKAAEAVQVMQKRQAEGQS
GGGGAAPLTGPFQIGYKIKDDEEVKRLGDIYDEERRITVQGLIFATEIRELRSGRSLLQF
KITDYTSSMIIKMFSRDNEDAAMFQNLKKGMWVKVRGSVQNDTFVRDLIMMAQDVNEIAG
VKRLDTAEEKRAELHLHSPMSQMDATSSVDSLFKQAADWGHKAIAITDHSVAQSFPEAYG
AGQKYGLKVIFGIEANLIDDGVPIAYNDQHIALEDATYCVFDVETTGLSAVYDTIIELAG
VKMKNGEIIDKFEAFIDPGHPLSATTINLTGITDDMVKGSDPIDVVLKRFKEWSGDDILV
AHNASFDMGFINTAYEKVGLEKAENAVVDTLELARFLYPHFKNHRLNTLTKKFNIILEQH
HRAVFDAEATAYLAWKLIKDAKEMHNIDFHDSLNDYMGEGDAYKRARPFHATIYAQTAVG
LKNLFKLITMSNINYFYRVPRIPRSQLKKLREGLIIGTACSQGELFEAMMQKGMQAAEKV
AEFYDFIEVQPKPVYAPLIERELVRDEKALEEILKNIVRVGEKTGKPVVATGNVHYKDPV
DKIYRKILIHSQGGANPLNRAELPDVHFRTTDEMLKEFAFLGEEKAKEIVVTNANLVVDW
MEDLKPIKDELYTPKIDGAEDEVRNMSYAMAHQLYGEKLPEIVEARLEKELKSIIGHGFA
VIYLISHKLVKKSLVDGYLVGSRGSVGSSFVATMTEITEVNPLPPHYLCPNCKDSEFFDD
GSVGSGFDLPDKDCPHCGTPYQKEGQDIPFETFLGFKGDKVPDIDLNFSGDYQPVAHAYT
KEIFGEDYVFRAGTIGTVAEKTAFGYVRNYERDMNMTIRGAEIDRLVAGCTGVKRTTGQH
PGGIIVIPDYMDVYDFTPVQFPADATDSEWKTTHFDFHSIHDNVLKLDILGHDDPTAIRM
LQDLSGIDPKTIPTDDPDVMKLFGSTESLGVKPADIDSKTGTLGIPEFGTRFVRQMLEQT
KPTTFSELVQISGLSHGTDVWLGNAEELIKNKTCELPDVIGCRDDIMVFLIYQGLESSLA
FKIMESVRKGKGLTEEMEEAMMANKVPLWYIESCKKIKYMFPKAHAAAYVLMAVRIAYFK
VHYPLYFYATYFTVRADDFDLTSMVNGKEAVKATMKEVNDKGMEASTKEKNLLTVLEIAN
EMLARGFHFQKVDLYKSSADEFIIDGDSLIPPFNAIPSLGTNVAKQIVAARENGEFLSKE
DLQQRGKVSKTIIQYMDDQGCLEGLPDQNQLSLF
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
gtgccagatgaaacttcactcgttcctataaaaacgggttatgagggacatctggctttt
ataaatttaaatgaaggggtgttattcggaatgactgcaaaagaggaagaaaaacaagaa
cgatttcagctgttaatgacacaaatcggtttacaagatgtaacaacttacgaagaattt
acaaaagatgctaaaatcgaaaaactcgttgccgacaagaaaaataaaacatggcaattt
catttacacgttccacaaatttttccagcagcacttttccatatgatggatgttggaatg
aagcgtgcgttcagccaaattgcggaaacagaaatgcaaattgttccagaaaatcaaaca
attgacgaaacactcattcaggattattggaacttaatcgtagagccaattgggaagcag
tcaccgatgattggaaagcttttaatggagcaaaaacctacatttaaagaacctcatttt
attgaagtagcggttcataatgacatggaagaagcgactattcagcaacgattccagacg
aaaattattgaaagttacgggaaagctggatttccacgccttgccatgaaaatgcacttg
cttgaccagtctgaaacagaggaatataaagcttttgcactggccaaacaagaagaagat
cagaaaaaagccgctgaagctgtgcaagttatgcaaaaacgacaagcagaagggcaaagc
ggtggcggtggagctgctccactaactggtccgttccaaattggttataaaattaaagac
gatgaagaagttaaacgtcttggggacatttatgatgaggagcgacgtattaccgttcaa
ggcttaatcttcgcgacagaaattagagagcttcgcagtggtcgtagtttgttacaattc
aaaattactgattatacaagttcaatgattataaaaatgttttctcgtgataacgaggat
gcggcgatgttccagaatttgaaaaaaggtatgtgggttaaagttagaggaagcgttcaa
aacgatactttcgtgcgggacttaatcatgatggcgcaagatgtcaatgaaatcgctgga
gtgaagcgtcttgatactgctgaagaaaaacgcgcagaactacatcttcattctccaatg
agtcaaatggatgccacttcatctgttgattcactgttcaaacaagctgctgattgggga
cataaagcgattgctattactgatcactctgttgcccaatctttcccagaagcgtatgga
gcagggcaaaagtatggcttaaaggttatttttggcatcgaagcaaatcttatagatgat
ggtgtgccaatcgcttataacgatcaacatattgctttggaagatgcaacatattgcgta
tttgacgttgaaacaacaggtttatccgccgtttatgatacgattatcgaacttgctggc
gtaaaaatgaaaaatggtgaaattattgataaatttgaagcttttattgatcctggacac
ccgctttctgcaaccactattaatttaactggtattacagatgacatggtaaaaggttct
gatccaattgatgttgttttaaaaagatttaaagaatggagcggtgatgatattcttgtg
gcccataatgcttcttttgacatgggttttattaacactgcttatgaaaaagttggacta
gaaaaagcagaaaatgcggttgtcgatacattagaattagcacgttttctttacccacat
tttaaaaatcaccgcttgaatactttgacaaagaaattcaatattattcttgaacaacat
caccgggctgtttttgatgcggaagctacagcgtatttggcttggaagttaattaaagat
gcgaaagaaatgcacaacatcgattttcacgattctttaaatgactatatgggagaaggc
gacgcatacaagcgcgcgcgaccattccacgccacaatttacgcacaaacggctgttggt
ttgaagaatctctttaaattaattacgatgtccaatattaattacttttaccgggtacca
cgtattcctcgctcgcagctaaaaaaattacgcgaaggcttaattattggaactgcttgt
agccaaggagaattatttgaagcaatgatgcaaaaagggatgcaagctgcagaaaaagta
gcggagttctatgatttcattgaagttcaaccgaagccagtttatgcaccgcttattgaa
cgtgaactagttcgtgacgaaaaagctttagaagaaatattgaaaaatatcgtccgcgtc
ggtgagaaaactggaaaacctgtcgttgcaacaggtaatgtacattacaaagatccagtg
gataaaatttatcgtaaaattttaatccattcgcaaggaggagcaaatccgcttaatcgg
gctgaattacctgatgttcatttccgtacaacggatgaaatgttgaaagaatttgccttc
cttggtgaagaaaaagcaaaagaaattgttgtaactaatgcgaatttagtcgttgattgg
atggaagaccttaaaccaatcaaagacgaattatatacaccaaaaattgatggtgcagaa
gacgaagttcgaaatatgagttatgcgatggcgcatcaactttatggtgagaaactgcca
gaaatcgtggaagctagactagaaaaagagctgaaaagtattatcggccatggtttcgca
gttatttatctcatttcacataagcttgttaagaaatcacttgtagatggctatctggtt
ggttcgcggggatcggttggttcttctttcgttgctacaatgacggaaattaccgaagta
aacccacttccaccacattatctttgcccgaattgtaaggattctgagttctttgatgat
ggttcggttggttctggttttgacttaccggataaagattgcccgcactgcggaacccct
tatcaaaaagaaggccaagatattcctttcgaaactttcttaggatttaaaggggataaa
gtacccgatattgacttgaacttctcaggggattatcaaccggtagcccatgcttataca
aaagaaatttttggtgaggattacgttttccgtgcggggacgattggtaccgttgcagag
aaaaccgcttttggttatgttcgaaattatgaacgcgatatgaatatgactattcgcggg
gcagaaattgatcgactcgtcgctgggtgtacaggcgttaaacgaactaccgggcaacat
ccaggtggtattatcgttattccagattatatggatgtttacgattttacaccggtgcag
ttcccagctgatgcgacggactcagaatggaaaacgacccattttgacttccattcgatt
catgataacgtattaaaattagatatacttggacacgatgatccgactgctatccggatg
ttacaggatttaagcggtatcgatccaaaaacgattccaaccgatgatccagatgtcatg
aaactatttgggtctacagagtcacttggtgttaagcctgcagatattgattcaaaaaca
ggaacattaggaatccctgaatttgggacgcgttttgtaagacaaatgctagaacaaact
aaaccaacaacattttctgagctagtgcaaatctctggtctttcccacgggacggacgtt
tggcttggaaatgcggaagaattaatcaaaaacaaaacatgcgaactgccagatgtaatt
ggttgtcgtgatgatattatggttttcctaatttatcaagggctagaaagttcattagcc
tttaagatcatggagtctgtgcgtaaagggaaaggcttaacggaagaaatggaagaagca
atgatggcgaataaagtgccactttggtacattgaatcttgtaaaaaaatcaaatacatg
ttccccaaagcccatgctgccgcttacgttttaatggcagtccggattgcttatttcaaa
gtacattatccactatatttttatgcaacttatttcaccgttcgtgccgatgatttcgat
ttaacatcgatggtaaacggaaaagaagccgtgaaagcaaccatgaaagaagtaaatgat
aaagggatggaagcttcaacgaaagagaaaaacttattaaccgttttagaaattgcgaat
gaaatgctagctcgaggattccatttccaaaaagttgatttgtataaatcgtctgctgat
gagttcattattgacggagactcacttattccgccattcaatgcgattccaagtcttgga
accaatgtagcaaaacaaatagttgccgctcgtgaaaatggagagtttttgtcgaaagaa
gacttacaacagcgcggaaaagtatccaaaacaatcattcagtacatggatgatcaagga
tgcttggaaggattgcctgatcaaaatcagttgtcactattctaa
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integrated database retrieval system