KEGG   Listeria monocytogenes SLCC2540 (serotype 3b): LMOSLCC2540_1370
Entry
LMOSLCC2540_1370  CDS       T02242                                 
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha chain, Gram-positive type
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
lmot  Listeria monocytogenes SLCC2540 (serotype 3b)
Pathway
lmot03030  DNA replication
lmot03430  Mismatch repair
lmot03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lmot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LMOSLCC2540_1370 (polC)
   03430 Mismatch repair
    LMOSLCC2540_1370 (polC)
   03440 Homologous recombination
    LMOSLCC2540_1370 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lmot03032]
    LMOSLCC2540_1370 (polC)
   03400 DNA repair and recombination proteins [BR:lmot03400]
    LMOSLCC2540_1370 (polC)
Enzymes [BR:lmot01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LMOSLCC2540_1370 (polC)
DNA replication proteins [BR:lmot03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LMOSLCC2540_1370 (polC)
DNA repair and recombination proteins [BR:lmot03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LMOSLCC2540_1370 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T DNA_pol3_finger PHP DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 tRNA_anti-codon HHH_3 RNase_H_2 Rv2179c-like DEDDh_C Peripla_BP_1
Other DBs
NCBI-ProteinID: CBY76011
LinkDB
Position
1356087..1360511
AA seq 1474 aa
MPDETSLVPIKTGYEGHLAFINLNEGVLFGMTAKEEEKQERFQLLMTQIGLQDVTTYEEF
TKDAKIEKLVADKKNKTWQFHLHVPQIFPAALFHMMDVGMKRAFSQIAETEMQIVPENQT
IDETLIQDYWNLIVEPIGKQSPMIGKLLMEQKPTFKEPHFIEVAVHNDMEEATIQQRFQT
KIIESYGKAGFPRLAMKMHLLDQSETEEYKAFALAKQEEDQKKAAEAVQVMQKRQAEGQS
GGGGAAPLTGPFQIGYKIKDDEEVKRLGDIYDEERRITVQGLIFATEIRELRSGRSLLQF
KITDYTSSMIIKMFSRDNEDAAMFQNLKKGMWVKVRGSVQNDTFVRDLIMMAQDVNEIAG
VKRLDTAEEKRAELHLHSPMSQMDATSSVDSLFKQAADWGHKAIAITDHSVAQSFPEAYG
AGQKYGLKVIFGIEANLIDDGVPIAYNDQHIALEDATYCVFDVETTGLSAVYDTIIELAG
VKMKNGEIIDKFEAFIDPGHPLSATTINLTGITDDMVKGSDPIDVVLKRFKEWSGDDILV
AHNASFDMGFINTAYEKVGLEKAENAVVDTLELARFLYPHFKNHRLNTLTKKFNIILEQH
HRAVFDAEATAYLAWKLIKDAKEMHNIDFHDSLNDYMGEGDAYKRARPFHATIYAQTAVG
LKNLFKLITMSNINYFYRVPRIPRSQLKKLREGLIIGTACSQGELFEAMMQKGMQAAEKV
AEFYDFIEVQPKPVYAPLIERELVRDEKALEEILKNIVRVGEKTGKPVVATGNVHYKDPV
DKIYRKILIHSQGGANPLNRAELPDVHFRTTDEMLKEFAFLGEEKAKEIVVTNANLVVDW
MEDLKPIKDELYTPKIDGAEDEVRNMSYAMAHQLYGEKLPEIVEARLEKELKSIIGHGFA
VIYLISHKLVKKSLVDGYLVGSRGSVGSSFVATMTEITEVNPLPPHYLCPNCKDSEFFDD
GSVGSGFDLPDKDCPHCGTPYQKEGQDIPFETFLGFKGDKVPDIDLNFSGDYQPVAHAYT
KEIFGEDYVFRAGTIGTVAEKTAFGYVRNYERDMNMTIRGAEIDRLVAGCTGVKRTTGQH
PGGIIVIPDYMDVYDFTPVQFPADATDSEWKTTHFDFHSIHDNVLKLDILGHDDPTAIRM
LQDLSGIDPKTIPTDDPDVMKLFGSTESLGVKPADIDSKTGTLGIPEFGTRFVRQMLEQT
KPTTFSELVQISGLSHGTDVWLGNAEELIKNKTCELPDVIGCRDDIMVFLIYQGLESSLA
FKIMESVRKGKGLTEEMEEAMMANKVPLWYIESCKKIKYMFPKAHAAAYVLMAVRIAYFK
VHYPLYFYATYFTVRADDFDLTSMVNGKEAVKATMKEVNDKGMEASTKEKNLLTVLEIAN
EMLARGFHFQKVDLYKSSADEFIIDGDSLIPPFNAIPSLGTNVAKQIVAARENGEFLSKE
DLQQRGKVSKTIIQYMDDQGCLEGLPDQNQLSLF
NT seq 4425 nt   +upstreamnt  +downstreamnt
gtgccagatgaaacttcactcgttcctataaaaacgggttatgagggacatctggctttt
ataaatttaaatgaaggggtgttattcggaatgactgcaaaagaggaagaaaaacaagaa
cgatttcagctgttaatgacacaaatcggtttacaagatgtaacaacttacgaagaattt
acaaaagatgctaaaatcgaaaaactcgttgccgacaagaaaaataaaacatggcaattt
catttacacgttccacaaatttttccagcagcacttttccatatgatggatgttggaatg
aagcgtgcgttcagccaaattgcggaaacagaaatgcaaattgttccagaaaatcaaaca
attgacgaaacactcattcaggattattggaacttaatcgtagagccaattgggaagcag
tcaccgatgattggaaagcttttaatggagcaaaaacctacatttaaagaacctcatttt
attgaagtagcggttcataatgacatggaagaagcgactattcagcaacgattccagacg
aaaattattgaaagttacgggaaagctggatttccacgccttgccatgaaaatgcacttg
cttgaccagtctgaaacagaggaatataaagcttttgcactggccaaacaagaagaagat
cagaaaaaagccgctgaagctgtgcaagttatgcaaaaacgacaagcagaagggcaaagc
ggtggcggtggagctgctccactaactggtccgttccaaattggttataaaattaaagac
gatgaagaagttaaacgtcttggggacatttatgatgaggagcgacgtattaccgttcaa
ggcttaatcttcgcgacagaaattagagagcttcgcagtggtcgtagtttgttacaattc
aaaattactgattatacaagttcaatgattataaaaatgttttctcgtgataacgaggat
gcggcgatgttccagaatttgaaaaaaggtatgtgggttaaagttagaggaagcgttcaa
aacgatactttcgtgcgggacttaatcatgatggcgcaagatgtcaatgaaatcgctgga
gtgaagcgtcttgatactgctgaagaaaaacgcgcagaactacatcttcattctccaatg
agtcaaatggatgccacttcatctgttgattcactgttcaaacaagctgctgattgggga
cataaagcgattgctattactgatcactctgttgcccaatctttcccagaagcgtatgga
gcagggcaaaagtatggcttaaaggttatttttggcatcgaagcaaatcttatagatgat
ggtgtgccaatcgcttataacgatcaacatattgctttggaagatgcaacatattgcgta
tttgacgttgaaacaacaggtttatccgccgtttatgatacgattatcgaacttgctggc
gtaaaaatgaaaaatggtgaaattattgataaatttgaagcttttattgatcctggacac
ccgctttctgcaaccactattaatttaactggtattacagatgacatggtaaaaggttct
gatccaattgatgttgttttaaaaagatttaaagaatggagcggtgatgatattcttgtg
gcccataatgcttcttttgacatgggttttattaacactgcttatgaaaaagttggacta
gaaaaagcagaaaatgcggttgtcgatacattagaattagcacgttttctttacccacat
tttaaaaatcaccgcttgaatactttgacaaagaaattcaatattattcttgaacaacat
caccgggctgtttttgatgcggaagctacagcgtatttggcttggaagttaattaaagat
gcgaaagaaatgcacaacatcgattttcacgattctttaaatgactatatgggagaaggc
gacgcatacaagcgcgcgcgaccattccacgccacaatttacgcacaaacggctgttggt
ttgaagaatctctttaaattaattacgatgtccaatattaattacttttaccgggtacca
cgtattcctcgctcgcagctaaaaaaattacgcgaaggcttaattattggaactgcttgt
agccaaggagaattatttgaagcaatgatgcaaaaagggatgcaagctgcagaaaaagta
gcggagttctatgatttcattgaagttcaaccgaagccagtttatgcaccgcttattgaa
cgtgaactagttcgtgacgaaaaagctttagaagaaatattgaaaaatatcgtccgcgtc
ggtgagaaaactggaaaacctgtcgttgcaacaggtaatgtacattacaaagatccagtg
gataaaatttatcgtaaaattttaatccattcgcaaggaggagcaaatccgcttaatcgg
gctgaattacctgatgttcatttccgtacaacggatgaaatgttgaaagaatttgccttc
cttggtgaagaaaaagcaaaagaaattgttgtaactaatgcgaatttagtcgttgattgg
atggaagaccttaaaccaatcaaagacgaattatatacaccaaaaattgatggtgcagaa
gacgaagttcgaaatatgagttatgcgatggcgcatcaactttatggtgagaaactgcca
gaaatcgtggaagctagactagaaaaagagctgaaaagtattatcggccatggtttcgca
gttatttatctcatttcacataagcttgttaagaaatcacttgtagatggctatctggtt
ggttcgcggggatcggttggttcttctttcgttgctacaatgacggaaattaccgaagta
aacccacttccaccacattatctttgcccgaattgtaaggattctgagttctttgatgat
ggttcggttggttctggttttgacttaccggataaagattgcccgcactgcggaacccct
tatcaaaaagaaggccaagatattcctttcgaaactttcttaggatttaaaggggataaa
gtacccgatattgacttgaacttctcaggggattatcaaccggtagcccatgcttataca
aaagaaatttttggtgaggattacgttttccgtgcggggacgattggtaccgttgcagag
aaaaccgcttttggttatgttcgaaattatgaacgcgatatgaatatgactattcgcggg
gcagaaattgatcgactcgtcgctgggtgtacaggcgttaaacgaactaccgggcaacat
ccaggtggtattatcgttattccagattatatggatgtttacgattttacaccggtgcag
ttcccagctgatgcgacggactcagaatggaaaacgacccattttgacttccattcgatt
catgataacgtattaaaattagatatacttggacacgatgatccgactgctatccggatg
ttacaggatttaagcggtatcgatccaaaaacgattccaaccgatgatccagatgtcatg
aaactatttgggtctacagagtcacttggtgttaagcctgcagatattgattcaaaaaca
ggaacattaggaatccctgaatttgggacgcgttttgtaagacaaatgctagaacaaact
aaaccaacaacattttctgagctagtgcaaatctctggtctttcccacgggacggacgtt
tggcttggaaatgcggaagaattaatcaaaaacaaaacatgcgaactgccagatgtaatt
ggttgtcgtgatgatattatggttttcctaatttatcaagggctagaaagttcattagcc
tttaagatcatggagtctgtgcgtaaagggaaaggcttaacggaagaaatggaagaagca
atgatggcgaataaagtgccactttggtacattgaatcttgtaaaaaaatcaaatacatg
ttccccaaagcccatgctgccgcttacgttttaatggcagtccggattgcttatttcaaa
gtacattatccactatatttttatgcaacttatttcaccgttcgtgccgatgatttcgat
ttaacatcgatggtaaacggaaaagaagccgtgaaagcaaccatgaaagaagtaaatgat
aaagggatggaagcttcaacgaaagagaaaaacttattaaccgttttagaaattgcgaat
gaaatgctagctcgaggattccatttccaaaaagttgatttgtataaatcgtctgctgat
gagttcattattgacggagactcacttattccgccattcaatgcgattccaagtcttgga
accaatgtagcaaaacaaatagttgccgctcgtgaaaatggagagtttttgtcgaaagaa
gacttacaacagcgcggaaaagtatccaaaacaatcattcagtacatggatgatcaagga
tgcttggaaggattgcctgatcaaaatcagttgtcactattctaa

DBGET integrated database retrieval system