Ligilactobacillus murinus: CPS94_06660
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Entry
CPS94_06660 CDS
T07549
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lmur
Ligilactobacillus murinus
Brite
KEGG Orthology (KO) [BR:
lmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmur03400
]
CPS94_06660 (addA)
Enzymes [BR:
lmur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPS94_06660 (addA)
DNA repair and recombination proteins [BR:
lmur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CPS94_06660 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
DUF2059
AAA_12
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AWZ38616
LinkDB
All DBs
Position
complement(1317434..1321177)
Genome browser
AA seq
1247 aa
AA seq
DB search
MAEIEFTPGQLQAINDEGKNILVAASAGSGKTRVLVERVIRKIKEKTAVDEMLILTFTEA
AAREMKERIQGALRQAINAESEPETKRFYLQQLTKLNVADISTIDAFCLRMVQKYYYLAQ
IDPDFRLLTDETERALLRESVWEDLREELYGKLDPLFEQLTLNFSNDRSDDGLTELVMEL
FDFANVNPDPKAWLENLAKNYHLEAGNLEQSEFYRTEFLPYINEQLQKFADYMEQATLNL
EDIADPEDKLAKLKALYRTEAKELCQLAKLDLTKISYNELKVTLEAVKFKRAPAARLDDE
QKVLKNQAQALRDETKKQLNELLVNYFNAQESEVIELFKQAEILAKKAAEVVLRFMRRYQ
AEKKRRHVLEFSDLEHLTLKILRQQEDTSVKELLKARYQEIMVDEYQDTNQLQEAILTTL
AQDNMFMVGDVKQSIYAFRLADPTLFLGKYHKFGRSDDPNERIILAENFRSAENITATTN
FIFSQIMDQKIGEMDYDKNAQLVYGAKDYPKMSLVTEILLYTSEADPLNDPAKKPLKMRW
DQEPEAMGPDFEINSNQEGQIALVAKKIKELYDQKFGIYDRGSGQMRPITYGDIAILSET
RTNHLLLSEELKRLGIPFYVQKSQNYFQTTELRIMLALLALIDNPYQDIELAAVLRSPIV
GLKENELAYLRINDKSGDYFQALEKFYQDSSNQRKEPFVQALYAKITRFMEQLQGFRDLA
HQNELATLILAIYEQTGFLDYVGGMPGGAQRQANLHALYERAAMYEQSSFKGLFQFIGFI
KKMQEKQDDLSEAVLKTSDDTVNIMTIHGSKGLEFPVVFLIDAAKKFNMRSLDKKYILSE
KAGLAMNYLDQERRIEHETLVKNLAKQTARNKSAAEKMRLLYVALTRAKEKLFIVAGYDS
REQVEKLVNKAQTSELLLPDDVRANAKNFMDWILPAVARRKNIAQAFELLVNPPATLDEI
PAEFEVNFANYNDIFDEQRLAQVDLTKWFDEQTTAQVKLTPEMVTKIDQILAGKYQHEAA
TRTAAYQAVSDIKRLFDDPDLEKMAKITPETTANREVGDFRKPRFMTEEVRVTPAAIGTA
VHLLFQELDLTQTPTVTLIDDLLQRLIADDLITPEVAKQIDVTKLVAFYASPLGKDLLKN
HMRAKREVAFSMVLPAGKVFDDLDDTLNDPILVHGIMDGYFITENDEVILFDYKTDHIYG
EDGVEKIKQRYQGQLNLYQTALEQILNKPVTHKYLYLVELDQAIELP
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggctgagatcgaatttacacctggtcagctccaggcgatcaatgatgaaggcaaaaat
attttggttgctgcttcagccggctcggggaagacccgggtgttggtcgaacgtgttatc
agaaaaatcaaagaaaaaaccgcagtagacgagatgttgatcttgacctttactgaagca
gcagcgcgggaaatgaaagaacggatccaaggcgctttacgccaagcgatcaatgctgaa
tctgagcctgagactaagcgattttacctacaacaactgacaaaactcaatgttgccgat
atcagtacgatcgatgcattttgtttgcgcatggtccaaaaatattactatttagcccag
atcgatcctgattttcgattgttgactgatgaaactgagcgggctttactacgcgaaagt
gtttgggaagatctccgagaagaactttatgggaagttagatcccttgtttgaacaactg
acattgaatttttctaatgaccgcagtgatgatggtctgactgaacttgtgatggaatta
tttgattttgcaaatgtcaatcctgatcctaaagcttggcttgaaaatttggctaaaaat
tatcatttggaagctggaaatttagaacaaagtgagttttatcgcactgaatttcttccg
tatatcaatgagcaattgcaaaaattcgctgactatatggagcaagcaacgctgaactta
gaggatatcgctgatccagaagataagttagccaaattaaaagctctctatcgcacagaa
gcaaaagagttgtgtcaactagctaaacttgatctgacaaagatctcctataatgagcta
aaagtgactttagaggcagtaaaattcaaacgcgcccctgcagcacgcttagatgatgag
caaaaagtgctaaaaaatcaagctcaagctctgcgtgatgagacgaaaaaacagttgaac
gaacttttagtcaattattttaatgcccaagaaagtgaggtcattgagctatttaaacaa
gctgagatcttagctaagaaggcagctgaagtggtcttacgcttcatgcgtcgctatcaa
gcggagaaaaagcgccgacatgtcttagaatttagtgatttagaacacctgactttaaag
atcttacgtcaacaagaagatacaagtgtcaaagaactcttaaaagcgcgctaccaagag
atcatggtcgacgagtatcaagatactaatcagcttcaagaagcgatcttgacgactttg
gcgcaggataatatgtttatggtaggggatgtcaagcagtcgatctatgcgtttcggttg
gccgatccgacactgtttttaggtaaatatcataaatttggacgctcagatgatccaaat
gaacggatcatcttagcggagaatttccgctcggctgaaaatatcacagcaacgacgaac
tttatcttttcacagatcatggatcaaaagatcggggaaatggattatgataaaaatgca
cagttagtttatggagctaaagattatcctaaaatgtcgcttgtaaccgagatcttgtta
tacacctcggaagcagatcctttaaatgatcctgctaaaaaaccattaaaaatgcggtgg
gatcaagaaccagaagcgatgggacctgattttgagatcaattccaaccaagaaggtcag
atcgctttagtggcaaagaagatcaaagaattgtatgaccaaaagtttgggatctatgac
cgtggatcaggccagatgcgtccgatcacatacggcgatattgctattttatcagagaca
cgaaccaatcatttattattatctgaagagttaaagcgcctagggatcccattttatgtg
caaaagtcgcaaaattattttcaaacgacagaattgcggatcatgttggcacttttagct
ttgatcgacaatccttatcaagatatcgagttggctgcagttttgcgttcgccgatcgtg
gggctaaaggaaaatgagttagcttatctgcggatcaatgacaagagtggtgattatttc
caagcgttagaaaaattctatcaagactcaagcaatcagagaaaagaaccatttgttcaa
gcactctatgctaagatcacacgttttatggagcagctgcaaggttttagagatctcgcg
catcaaaatgaattagctaccttgatcctggcgatctatgaacagactggctttttagat
tatgtcgggggtatgcctgggggagcacaacggcaagccaatctgcacgcactttatgaa
agagctgcgatgtatgaacaaagtagttttaaggggctatttcagttcattggttttatc
aaaaagatgcaagaaaaacaagatgatctctcagaggctgtcttaaagacaagtgatgat
acggtcaatatcatgacgatccacggcagtaaggggctcgagtttccggtcgtgtttttg
attgatgcggctaaaaaattcaatatgcgctcattagataaaaagtatattttaagtgaa
aaagctggtctagcgatgaattacttagatcaagagcgccggatcgaacatgaaacgttg
gtcaaaaatcttgctaaacaaaccgctagaaataagagtgctgctgaaaagatgcgctta
ttgtatgttgccttgacacgggctaaagaaaaactctttatcgtagcaggctatgattca
cgtgaacaggtggaaaaattggtgaataaggctcaaacttctgaattgttattaccagat
gatgtgcgcgcaaatgccaaaaacttcatggattggatcttgccagcagttgcacgtcga
aaaaatattgctcaagcatttgagctcttagtaaacccacctgcaactttagatgagata
ccagcagaatttgaagtgaattttgctaattacaacgatatttttgatgaacaacggtta
gcgcaagtagatctaactaagtggtttgatgagcaaacaacagctcaagtcaaacttacc
cctgagatggtaactaagatcgatcagatcctagcaggaaagtatcaacatgaagcagca
actagaacggctgcctatcaagccgtttcagatatcaagcgtttgtttgacgatcctgac
cttgagaaaatggccaagatcacgccagagacgaccgctaatcgtgaagtcggcgatttt
agaaaaccgcgctttatgaccgaagaagtgcgggtgacacctgctgccatcgggacagct
gttcacttgctcttccaagaattggatctgactcagacgccaacggtcacgctgatagat
gatttattacaacgtttgatcgctgatgatctgatcacacctgaagtagctaaacagatc
gatgttactaagctcgtagccttttatgcgtcaccgttaggcaaagatctcttaaaaaat
catatgcgagccaagcgtgaagtagctttctcaatggttttgccagcgggtaaagtcttt
gacgacttggatgacacattgaatgatccgatcttagtccacgggatcatggatggttat
tttatcactgaaaatgatgaggtcattctctttgattacaagactgatcatatttatggt
gaagatggggtcgaaaagatcaagcagcgctatcagggacagttaaatttatatcaaacg
gctttagaacagatcttaaataagcctgtgacccataaatatctttatttagttgaactt
gatcaagcgatcgaattaccgtga
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