Listeria monocytogenes CFSAN006122: Y193_14515
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Entry
Y193_14515 CDS
T03478
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lmv
Listeria monocytogenes CFSAN006122
Pathway
lmv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Y193_14515 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmv03021
]
Y193_14515 (rpoB)
03400 DNA repair and recombination proteins [BR:
lmv03400
]
Y193_14515 (rpoB)
Enzymes [BR:
lmv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Y193_14515 (rpoB)
Transcription machinery [BR:
lmv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Y193_14515 (rpoB)
DNA repair and recombination proteins [BR:
lmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Y193_14515 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AHY99511
UniProt:
A0A5Z1J1V5
LinkDB
All DBs
Position
282623..286177
Genome browser
AA seq
1184 aa
AA seq
DB search
MSGHSGHDVKYGRHRTRRSFARISEVLELPNLIEIQTASYQWFLDEGLREMFRDISPIED
FAGNLSLEFIDYDLGEPKYSVEESKNRDANYAAPLRVKLRLINKETGEVKDQEVFMGDFP
LMTEMGTFIINGAERVIVSQLVRSPGVYFNGKLDKNGKKGFGSTVIPNRGAWLEYETDAK
DVVHVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNDYLRNTLEKDNTDNAEKALLEIY
ERLRPGEPPTVDNARSLLVSRFFDPKRYDLASVGRYKINKKLHLKNRLFNQTLAETLVDP
ETGEIIASKGDILDRRNLDQIIPNLENGVGFRTLRPTDGVMEDSVLVQSIKIYAPNDDEK
EINIIGNAYIEENVKHITPSDIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQ
FRIGLSRMERVVRERMSIQDMTTITPQQLINIRPVVASIKEFFGSSQLSQFMDQTNPLGE
LTHKRRLSALGPGGLTRERAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNK
FGFIETPYRRVDPETNRVTDKIDYLTADEEDNYVVAQANSKLDEQGTFTEEEVMARFRSE
NLAVEKERIDYMDVSPKQVVSVATACIPFLENDDSNRALMGANMQRQAVPLMHPEAPFVG
TGMEHVSAKDSGAAVTAKHDGIVEHVEAREIWVRRVSLVDGKEVTGGIDKYTLRKFVRSN
QGTCYNQRPNVAEGDRVVKGEILGNGPSMDSGELALGRNVLVAFMTWDGYNYEDAIIMSE
RLVKDDVYTSIHIEEFESEARDTKLGPEEMTRDIPNVGEDALRDLDERGIIRVGAEVKDN
DLLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKIFTREAGD
ELPPGVNQLVRVYIVQKRKIHEGDKMAGRHGNKGVISRILPEEDMPFMPDGTPVDIMLNP
LGVPSRMNIGQVLELHLGMAARALGIHVATPVFDGANEEDVWSTVEEAGMARDAKTILYD
GRSGEAFDNRISVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEILTIKSDDVVGRVKTYEAIVKGESVPEPGVPESFKVLIKELQSLG
MDVKMLSADEEEIEMRDMDDDDFTNQNDAFNIVQPENTAAEKTE
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaggacattcaggacatgatgtaaaatatggacggcatcgtacgcgtagaagtttt
gcgcgaatcagtgaagtacttgaattaccaaacttaattgagattcaaacagcttcttac
caatggttcttagatgaagggctacgtgagatgttccgcgatatttcgccaattgaggat
tttgcgggtaatttatctttagaattcattgattacgatcttggagaaccgaaatactcg
gtagaagaatctaagaaccgtgatgcaaactatgcggctccactacgcgtgaagttgcgc
ctaatcaacaaagaaaccggcgaagtgaaagaccaagaagtatttatgggtgatttccca
ctaatgactgaaatgggtacgttcattattaatggggcagaacgtgttatcgtttcccaa
ttagttcgttctccaggtgtttacttcaatggaaaactagacaaaaatggtaaaaaaggc
tttggttctactgtcatccctaaccgtggggcttggcttgagtatgaaacagatgctaaa
gacgttgtacacgttcgtattgaccgtacacgtaaattaccagtaactgttttacttcgt
gcactaggctttggttccgatcaagaaattattgatttaatcggggacaatgactacttg
cgcaacacactggaaaaagacaacactgacaatgctgaaaaagcacttctagaaatttac
gaaagattacgtccgggtgaacccccaacagttgataacgctagaagcttactagtttct
cgtttctttgatccaaaacgctacgatcttgcaagcgttggacgttataaaatcaacaaa
aaattacatctaaaaaaccgtctattcaaccaaacattagcagaaactttagtggatcca
gaaactggtgagattatcgcttctaaaggtgacattttggatcgtcgtaatttagatcaa
attattcctaatttagaaaacggtgtaggtttccgcacacttcgtccaactgatggagtt
atggaagatagcgtactcgttcaatctattaaaatctacgcaccaaatgatgacgaaaaa
gaaatcaacatcattggtaacgcgtatattgaagaaaatgtaaaacacatcacgccttct
gatattatttcatccattagctacttctttaacttgctacatggtgttggcgatacagat
gacatcgatcacctaggtaatcgtcgtcttcgttctgttggtgaacttttacaaaaccaa
ttccgtatcggtttatcccgtatggaacgtgtagttcgtgagcgtatgtctattcaagat
atgactacaattacaccacaacaattgattaatattcgcccagtagttgcttctattaaa
gaattctttggtagctcgcagttatctcagttcatggatcaaacaaatccacttggcgaa
cttacgcataaacgtcgtctttcagcgcttggacctggtggtttgacgcgtgaacgtgct
ggttatgaagtacgtgacgtgcattactctcactatggtcgtatgtgtccgattgaaacg
ccagagggaccaaacattggtttgatcaactccctttcttcctttgcgaaggtaaataaa
ttcggctttatcgaaacgccttaccgccgcgtagatcctgaaacaaaccgtgttactgat
aagattgattatctaactgcggatgaagaggataattacgtagtagcgcaagcgaactcg
aaattagacgaacaaggtactttcacagaagaagaagttatggctcgtttccgttcagaa
aacttagcggtagaaaaagaacgtattgactacatggatgtatcgcctaaacaggttgta
tctgttgcgacagcatgtattccgttccttgaaaacgatgatagtaaccgtgcgctaatg
ggagcgaacatgcaacgtcaagcagttcctcttatgcaccctgaagctccatttgttgga
acaggtatggaacacgtatctgcaaaagactctggtgctgctgtaactgccaaacatgac
ggtattgtagaacacgttgaagctcgcgaaatctgggttcgtcgtgtatctctagtggat
ggcaaagaagtaactggcggaattgataaatatacattacgtaaatttgttcgttctaac
caaggtacttgttataaccaacgtccaaacgtagcagaaggtgaccgcgttgttaaagga
gaaatccttggtaacggtccatcaatggattccggtgaacttgctcttggtcgtaacgta
ctagttgcgttcatgacttgggatggttataactacgaggatgcgatcatcatgagtgaa
cgtcttgtaaaagatgacgtttatacttcgattcatattgaagaattcgaatcagaagct
cgtgatacaaaactcggacctgaagaaatgactcgtgatattccaaacgttggggaagat
gctttacgcgaccttgacgaacgtggaattatccgtgttggtgctgaagtaaaagacaac
gaccttctagttggtaaagtaacaccaaaaggagttaccgaattaactgcagaagaacgt
ttattacacgctatctttggtgaaaaagcacgtgaagttcgcgatacttcattacgtgta
cctcatggcggcggcggaatcgtgcttgacgtgaagatctttacacgtgaagctggcgac
gaactaccacctggtgtaaaccaattagtacgtgtttatattgtacaaaaacgtaaaatc
cacgaaggcgataaaatggccggacgtcacggtaacaaaggggttatctcccgtatttta
cctgaagaagatatgccatttatgccagacggaacacctgttgatatcatgcttaaccca
ctaggggtaccatctcgtatgaatatcggacaagtacttgagctacacttaggtatggct
gctcgtgctttaggaattcacgttgcaacaccagtatttgatggtgcgaatgaagaagac
gtttggagcacagtggaagaagctggtatggcccgcgatgcgaaaacaattctttatgac
ggacgttctggtgaagcatttgataaccgtatctctgtaggtgtaatgtacatgatcaaa
cttgcccacatggttgatgataaacttcatgcgcgttcaactggaccttactctctagta
acgcaacaaccgcttggtggtaaagcacaatttggtggacaacgttttggtgagatggaa
gtatgggcactggaagcttatggtgctgcttatacacttcaagaaatcctaacgattaaa
tccgatgacgtggttggtcgtgtgaaaacttacgaagcgattgttaaaggcgaaagcgtt
ccagaacctggtgtgccagaatccttcaaagtactcatcaaagagcttcaaagtcttgga
atggatgttaaaatgctttccgcagacgaagaagaaatcgagatgcgtgacatggatgat
gacgactttactaatcaaaatgatgccttcaatatcgtacaaccggaaaatacagccgct
gaaaagactgagtaa
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integrated database retrieval system
