Labrys sp. KNU-23: FZC33_25485
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Entry
FZC33_25485 CDS
T06193
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
lne
Labrys sp. KNU-23
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
FZC33_25485 (hrpB)
Enzymes [BR:
lne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FZC33_25485 (hrpB)
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Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_30
ResIII
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QEN91303
UniProt:
A0A5C1WS17
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All DBs
Position
1:3476583..3479060
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AA seq
825 aa
AA seq
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MRVFDQPLPIDDALPALREALRTRSNAVLVAPPGAGKTTRVPLALLDEAWTGVGKIIVLE
PRRLAARAAAARMAATLGEPVGATVGLRVRLESRISARTRIEVVTEGVFARMILDDPLLD
GVAAVLFDEFHERSLDADQGLAFALDAQAGLREDLRILPMSATIDGARVAALLGDAPVIE
SAGRAFPVVTHYLGRDPRQRLDEAVADAVLRALRAETGSILVFLPGQSEITRTARLLAER
NLGDGVDIAPLFGAMEAGDQDRAVAPAPAGRRKVVLSTSIAETSLTIEGVRVVIDAGLAR
VPRYEPDLGLTRLETVRVSRASADQRRGRAGRTEPGACYRLWEEAATGAFEAFAKPEILA
ADLSPLLLDCAAWGVGDPLSLAWLDAPPAPALKEARALLTAIEAVDADGRLTEMGRHLSS
LALPPRLARMIVSAAPAGEAMLAAEIAAILSERGLGGDGTDLVERIERFRRDRGGRAQDM
RRLARNWARTASREAGRGEGGESDPARAGAVLALAYPDRVAVARGQPGSFTMENGRAARL
EPHDRLAREPTLAIAEMAGSAGASRILLAAPIAAEEIAALSGVSESVSMGYDAASASLKA
RAVRRYRRLVLQEVTAPLTLDAEAAAMLARGLAQAGIGRLPWSKAQRQVRDRVAFLSASG
SPDWPALSDQDLAENAETWLAPVIDGVRGLSGITAEHLENALAGLLPWHERRRLDTEAPA
FFEAPTGSHLAIDYEAEGGPAISVRVQELFGLATHPSIAGGRVPLTINLLSPAHRPVQVT
KDLPGFWKGSYAAVRTEMKGRYPRHPWPEDPAAALPTTRAKPRGT
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgttcgatcagcccttgcccatcgacgatgccctgccggccctcagggaggcc
ctgcggacgcgctccaatgctgtcctcgtcgcgccgcccggtgcgggcaagaccacgcgc
gtgccgctggccctgctcgatgaggcctggacaggcgtgggcaagatcatcgtgctggag
ccgcgtcgccttgccgcgcgcgccgctgccgcccgcatggctgccacattgggcgaaccg
gttggcgccacggtcggcctgcgcgtgcgtctcgaatcgcgcatctcggccagaacgcgc
atcgaagtggtgacggagggggtgtttgcccgcatgattctcgacgaccccttgctcgac
ggcgtggcggccgtgctgttcgacgaattccacgaacgctcgctcgatgccgaccaaggg
cttgccttcgcgctcgatgcccaggccgggctgcgcgaggacctgcgcatcctgccgatg
tcggcgacgatcgacggggcgcgcgtcgccgcgcttctgggggatgcgccggtgatcgag
agtgccggccgcgcctttccagtggtgacgcattatctcggccgcgatccgcgccagcgg
ctcgacgaggcggtcgccgacgcggtgttgcgggccttgagggcggagacgggctcgatc
ctggtgttcctgcccggccagagcgagatcacccgcacggcacggctgctggccgagcgc
aatctgggagacggtgtcgacatcgccccgctgttcggcgccatggaggcgggagaccaa
gaccgtgccgtggcccccgcgccggcggggcgccgcaaggtcgtactgtcaacctcgatc
gccgagaccagcctcaccatcgagggcgtgcgggtggtcatcgatgccggcctggcccgc
gtgccgcgctatgagccggatcttggcctgacccggcttgaaaccgtgcgggtgtcgcgg
gcgagcgccgaccagcggcgcggccgcgccgggcgtaccgagccgggggcgtgctaccgg
ctgtgggaggaggcggccaccggcgccttcgaggccttcgccaagcccgagatcctggcg
gccgatctcagcccattgttgctcgattgcgctgcctggggcgtcggcgatcccctgtcg
cttgcctggctcgacgccccgcctgcgcccgcgctcaaggaggcgagggcgttgctgacc
gcgatcgaggctgtcgatgccgacggccggctcaccgaaatggggcgccacctctccagt
ctggccctgccgccgcggctggcgcgcatgatcgtatcagccgcgccggcgggagaagcc
atgctcgcagcggaaatcgccgctatcctgtcggagcgtggcctcggcggcgacggcacc
gacctcgtcgagcgcatcgaacgctttcggcgggatcgcggcgggcgggcgcaggacatg
cgccggctggccaggaactgggcaaggacggcgagccgggaggccggaaggggcgagggc
ggcgagagcgatccggcgcgggccggtgcggtacttgccctggcctatccggaccgcgtt
gcggtagcgcgggggcagccgggcagcttcaccatggaaaatggccgggccgcccgcctg
gagccgcatgaccgcctggcccgcgagccgacgctcgccatcgccgagatggccggcagc
gccggcgcgagccgtatcctcctggcggccccgatcgctgccgaggagatcgcggccctg
tccggtgtcagcgaaagcgtgagcatgggctatgatgccgccagcgccagcctgaaggct
cgcgctgtcaggcgctaccgccgcctcgtgctgcaggaggtcacggcgccgctgaccctg
gacgccgaggcagccgccatgctggcccgcggcctggcccaagccggtattggccgcctg
ccatggagcaaggcccagcgccaggtgcgcgaccgtgtggccttcctctccgccagtggc
tcgccggattggcccgctctttccgaccaggacctagccgagaatgccgaaacctggctc
gccccggtcatcgacggggtgcggggcctgtccggcatcacggccgagcatctggagaat
gcccttgcgggcctgctgccctggcacgagcgccggcggctcgataccgaagccccggcc
tttttcgaggcgccgaccggctcgcatctcgctatcgactacgaggcggagggcgggcct
gccatctcggtgcgcgtgcaggaactgtttggtctcgccacccatcccagcatcgccggc
gggcgcgtaccgctcaccatcaacctgctttcccccgcccaccggcccgtgcaggtgacc
aaggatctgccaggcttctggaagggctcgtatgccgccgtccggaccgagatgaagggg
cgctatccccggcatccctggcccgaggatccggccgcggctctgccgaccacccgggcg
aaaccgcgcggcacctga
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