Labrys sp. KNU-23: FZC33_32920
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Entry
FZC33_32920 CDS
T06193
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lne
Labrys sp. KNU-23
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lne03016
]
FZC33_32920 (rnd)
Enzymes [BR:
lne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FZC33_32920 (rnd)
Transfer RNA biogenesis [BR:
lne03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FZC33_32920 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QEN90806
UniProt:
A0A5C1WLP2
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All DBs
Position
1:complement(5084469..5085641)
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AA seq
390 aa
AA seq
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MPQSSAPSAAIITTTQDLEAACARLAAHAFVTVDTEFLRETTFWPKLCVVQVASPEEAVV
VDALAEGLDLAPLFELLRNEKVLKVFHAARQDIEIVWHLAGFIPTPLFDTQVAAMVLGYG
DSIAYDQLVQRITNAHIDKSSRFTDWSKRPLTQAQITYAVSDVTHLRDVYLKLAASLEKR
KRSHWVGDEMSILTSPDTYRQAPEDAWRRVSGRVRKPRDLAVLIEVAAWREREAQSKNVP
RSRVLKDDAITEVALQAPDTPEKLAGIRMIPKGWERSRPGLDLIEAVKAGLARDPASLPR
QAPPRIASNGAGATVELLKVLLKMVAESQGVAAKVIATTDELDMIADSDTANVPALHGWR
RELFGEKALALKHGKLALAIERGKVAAISR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgccacaatcttccgccccctccgccgccatcatcaccacaacccaggatctggaagcc
gcctgcgcccgtctcgccgcccatgcgttcgtgaccgtcgacacggagttcctgcgtgaa
accaccttctggcccaagctctgcgtcgtccaggtcgccagccccgaggaggccgtggtc
gtcgatgccctggccgaggggctcgacctcgctcccctgttcgagctcttgcgcaacgag
aaggtgctgaaggtcttccacgccgcccggcaggatatcgagatcgtctggcacctggcc
ggcttcattcccacgccgctgttcgatacgcaggtcgccgccatggtgctgggctatggc
gactccattgcctacgaccaattggtccagcgcatcaccaacgcccatatcgacaagtcc
tcccgcttcacggattggtcgaagcgccccctcacccaggcgcagatcacttacgccgtg
tccgacgttacccacttgcgcgacgtctatctcaagcttgcggcatcgcttgagaaaaga
aagagaagccattgggttggcgatgaaatgtcgattttgacatcgcctgacacctatcgg
caagcccccgaggatgcctggcgccgggtcagtgggcgcgtgcgcaaaccgcgcgatctg
gccgtgctgatcgaggtggcggcgtggcgtgagcgcgaggcccagtcgaagaacgtgccg
cgctcgcgcgtgctcaaggacgacgccatcaccgaagtcgcgctgcaggcaccggataca
cccgagaagctggccggcatccgcatgattcccaagggttgggaacgctcccgccccggt
ctcgacctgatcgaggcggtgaaggcaggcctggcgcgtgatcccgccagcctgccgcgg
caggcccctccgcgcattgccagcaacggagctggcgccaccgtcgagctgctcaaggtg
ttgctgaagatggtggccgaaagccagggtgtcgccgccaaggtcatcgccaccaccgat
gagctcgacatgatcgccgacagcgataccgccaatgtccctgccctgcacggctggcgc
cgcgaactgttcggcgaaaaggcgctcgcgctcaagcatggcaagctggcgctggcgatc
gaacgcggcaaggtcgcggcaattagccggtaa
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