Liquorilactobacillus nagelii: BSQ50_06560
Help
Entry
BSQ50_06560 CDS
T06235
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lng
Liquorilactobacillus nagelii
Brite
KEGG Orthology (KO) [BR:
lng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lng03016
]
BSQ50_06560
Enzymes [BR:
lng01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BSQ50_06560
Transfer RNA biogenesis [BR:
lng03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BSQ50_06560
Prokaryotic type
BSQ50_06560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AUJ32247
UniProt:
A0A3Q8CCA8
LinkDB
All DBs
Position
complement(1384064..1384978)
Genome browser
AA seq
304 aa
AA seq
DB search
MDGIIPLYKQKGMTSNDCVRRCRGILSMKRVGHSGTLDPNVDGVLLLCVGRATKVVNYLM
DSGKIYTGEITLGLATTTEDLDGEVIETKRLVRPFTSVEISEKMQLLTGEQIQIPPLYSA
VKVNGRRLYAYARAHQPVERPKRKINVAYFRQTGATTFDSATGQQKCYFEISCGKGTYVR
TLATDLGRLLGVPAVMSQLTRQQSGSFKISDTVSLSQLEKLTKLDRVQEIIADLDTALQK
FEHYQLDLTEWQKVRNGGFLKLQYISEKLVLTYNGKSRCIYHWHSKYLCYVPEQMIDLTE
GNQT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggacggaataattcctttatataaacaaaagggcatgaccagtaatgattgcgtacgt
cgctgtcggggaattttaagtatgaaacgtgtcggtcatagtgggaccttagatcctaat
gttgatggagtgctgttactttgtgtggggagagcaactaaagtcgtcaactatttgatg
gattctggcaagatatatactggtgaaataacattaggtctagcgacaacaaccgaagac
cttgatggcgaagtaattgagacaaagcgtttagtaagaccctttacttcagttgaaatt
agcgagaaaatgcagttattgactggagaacaaattcaaattccccctttgtattcggct
gttaaagtgaacggtcgtcgcttatatgcatatgcgcgagcccatcaaccagttgaaaga
cccaaacgaaaaatcaatgttgcttattttcgccaaacgggagcaactacttttgattcg
gcaacaggtcaacaaaaatgttattttgaaatcagctgtggtaaaggcacatatgtccga
actttagctacggatttaggccgcttgttaggagtaccagcagtaatgtcacagttaact
agacaacaaagtggcagctttaaaatttctgatacggtcagtttatcgcaactggaaaag
ttaaccaagttagatcgagtgcaggaaataatcgccgacttggatacagcattgcaaaaa
tttgagcattaccagctagacttaactgaatggcaaaaggtccggaacggtggtttcttg
aaattacagtatatatctgaaaagttagtgttaacttataacggaaaaagccgttgcatt
tatcattggcactcaaagtacctgtgttatgttccagaacagatgattgatttaacggaa
ggaaatcaaacgtga
DBGET
integrated database retrieval system
