KEGG   Liquorilactobacillus nagelii: BSQ50_07515
Entry
BSQ50_07515       CDS       T06235                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lng  Liquorilactobacillus nagelii
Pathway
lng03030  DNA replication
lng03410  Base excision repair
lng03420  Nucleotide excision repair
lng03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lng00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BSQ50_07515
   03410 Base excision repair
    BSQ50_07515
   03420 Nucleotide excision repair
    BSQ50_07515
   03440 Homologous recombination
    BSQ50_07515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lng03032]
    BSQ50_07515
   03400 DNA repair and recombination proteins [BR:lng03400]
    BSQ50_07515
Enzymes [BR:lng01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BSQ50_07515
DNA replication proteins [BR:lng03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BSQ50_07515
DNA repair and recombination proteins [BR:lng03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BSQ50_07515
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BSQ50_07515
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5
Other DBs
NCBI-ProteinID: AUJ32423
UniProt: A0A3Q8CCH8
LinkDB
Position
complement(1570140..1572800)
AA seq 886 aa
MDKAKKLLLIDGNSVAFRAFFALHQSLERFVNHDGLHTNAIYGFKKMLDNILTQVQPTHI
LVAFDAGKKTFRTEKFSDYKGGRSKTPSELSEQFPYLRKLLSAYGITSYELADYEADDII
GTLASQAEATDFSVTIVTGDRDLTQLATKKTTVAVTQKGVSEIELYTPAHVQEKYELTPQ
QIVDLKGLAGDASDNYPGVTKVGQKTALRLLHQFGSVAGIYEHLDEIKASKMKEHLIEDQ
KVAFLCRDLAQIRQDAPVEVQINDLKWQGKNQPELISFFEEMDFRSFLTEIQPENQPVAA
IEKLPVKVLQESNLADLPTQPAVVSFQLEMNGDNYHTAPFIGFTLAVDQVFYAARNVELL
KSPPLKNWLESSQVKIDLFDGKRTLVGLQRLGIHLSAVDFDLLLVSYLLDTSDNSNDLGK
LAQQHGYTAVVSDEEFYGRGAKYQIPSDDQLLFQHLAQKVLAISKLKVPLLKKLQANQQA
DLYLKIEKPLSLVLAAMEIAGIKIDTQRLTEMDSEFKEKISELEELIYQEAGEKFNLNSP
KQLGVILFEKLKLPVIKKTKTGYSTAVDVLEKLRGMAPIVDNILNYRQIAKLQSTYVTGL
LKVVSDQDQKVHTRYTQTLTATGRLSSVDPNLQNIPIRLAEGRKIRQAFVPSQPGWQIFS
SDYSQIELRVLAHVSQDQNMQQSFKDGVDIHANTAMKIFGLQDANEVTPNMRRQAKAVNF
GIVYGISDYGLSQNIGISRAQAKKFIEKYFEIFPGVHDYMKQIVKTAKEQGYVETIFKRR
RYLPQIKSSNYNLRSFAERTAMNTPIQGSAADIIKVAMIRMQRTLAEKHLQAKMLLQVHD
ELIFEAPVSEIPILEELVPKIMDSAVSLAVPLKVESAHGNTWFDAK
NT seq 2661 nt   +upstreamnt  +downstreamnt
atggataaagcgaagaaattattattgatcgacggcaacagtgtagcctttagagccttt
tttgctttacatcagtccttggagcgttttgtcaatcacgacgggcttcatactaatgca
atttatggtttcaaaaaaatgttggacaatattttaacccaggtacagccaacacacatc
ttggtggcttttgatgccggtaagaaaacttttcgaaccgaaaaatttagcgattataag
gggggacgctcgaaaaccccaagtgaattaagtgaacaatttccttatcttagaaaacta
ttaagtgcatatggaatcactagttatgaactggctgattatgaagcagatgatattatc
ggcactttagcgtctcaagctgaagctacagacttttcagttaccattgtcacgggggat
cgagatttaactcaattggcaactaaaaaaacgactgtcgctgtgacgcaaaaaggtgtt
agcgaaattgaattatacactccagcacatgtccaagagaaatatgaactaactccgcaa
cagattgttgatttgaagggactcgcaggtgatgcttcagataattatccaggggtaact
aaagtgggtcaaaaaacagctttacgcttattgcatcaatttggttcggttgctggtata
tatgaacacttagatgaaattaaagcctctaagatgaaagagcatctaattgaagatcaa
aaggttgcttttttatgtcgagatttggctcaaattagacaggatgcgcctgtggaggtt
caaataaatgatttaaaatggcaagggaaaaatcagcctgagttaatctctttttttgaa
gaaatggattttcgtagttttttaactgaaattcagcctgaaaatcaacctgttgcagca
attgaaaaattaccagttaaagtgttacaggagtctaatttagcagatttgccgactcaa
ccagctgtggttagttttcaattggaaatgaacggagataattaccatactgcgcctttt
attggctttactttggcggtcgatcaagtcttttatgcagcgcgaaatgttgaactatta
aagtctcccccattaaaaaattggttggaaagctcccaagtgaaaattgatttatttgat
ggtaagcgaactttagttggtttacaacgactagggattcatctgtcagcggtagatttt
gatttgttgttggtttcgtatttgttggatactagtgacaatagcaatgatctaggaaaa
ttggcacaacaacatgggtatacagctgttgttagtgatgaagaattctacggacgggga
gctaaatatcagattcccagcgatgatcaattgctttttcaacatttagcgcaaaaagta
ttagcaattagtaaattaaaagttccgttgttgaaaaagctccaagctaatcagcaagca
gatttgtatttaaaaattgaaaagccattatcgttagttttagcagcaatggaaatcgct
gggattaaaattgatacacaacgtttgaccgaaatggatagtgaatttaaggaaaaaatt
agtgaactcgaagaactaatttaccaagaagccggggaaaagtttaatttaaattcacct
aagcaattaggcgtaatcttatttgaaaaattaaaattgcccgtaattaaaaaaactaaa
accggttattcgacagcggttgatgttttggagaaattacgtggaatggcaccaattgtt
gataatattttaaattaccggcaaattgcaaaattgcagtcgacttatgttaccggtttg
ctaaaagttgtttcagatcaagatcaaaaagttcatacgcgttatacgcaaactttaaca
gcaactggtcgactatcctcagttgatcctaatttgcagaatattccaatcagattagct
gaaggtcgcaaaattcgacaagcttttgtcccgagtcagccaggttggcaaatattttct
tcagactattctcaaattgaattgcgcgtactagcccatgtttcacaagaccaaaacatg
cagcagtcttttaaagatggggtagatattcatgctaatacagcgatgaaaatatttggg
ttgcaagatgctaatgaagtaactccgaatatgcgtcggcaagcaaaagctgttaatttt
ggaattgtttatgggattagtgattacggtttatcgcaaaatattggaataagtcgcgca
caggccaaaaaatttatcgaaaaatactttgaaatttttcctggagttcatgattatatg
aagcaaattgtgaaaacagctaaagagcaggggtatgttgaaacgatctttaagcgtcgt
cgttatttgccgcaaatcaagagtagcaactataatttgcgttcatttgctgaacgaaca
gcgatgaataccccaattcaaggtagtgcagcggacattatcaaagttgcaatgatcagg
atgcagcggaccttagctgaaaagcatttacaagcaaaaatgttacttcaagttcacgat
gaattgatttttgaagctcctgttagcgagattccgattttagaagaacttgtgcctaaa
attatggatagtgctgtttcgctagctgttccgttaaaggttgagagtgctcacgggaat
acttggtttgatgctaaataa

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