Loa loa (eye worm): LOAG_03232
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Entry
LOAG_03232 CDS
T02664
Name
(RefSeq) hypothetical protein
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
loa
Loa loa (eye worm)
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loa03021
]
LOAG_03232
Transcription machinery [BR:
loa03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
LOAG_03232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
9940619
NCBI-ProteinID:
XP_020303374
LinkDB
All DBs
AA seq
1409 aa
AA seq
DB search
MCEKYVGRGPDRVRISASKCQQAVMEKESIVERQEQKPVMGDTQCDKYNLVDFSLEEVEE
EIRLEKIRQTSLKFSWDYLSQLLRRNLMEKRFVLSADDKEDLMQAAADMRKHMPSDSDRD
LSTHLRHLAESLSSDFQAHPGYKIRNADFSLEIAVSADGQQITSCSVSWFGERAVEAQAL
RLYVSRNRWDLVHTALTTMFHLVPSDLSRDEKIYCLRSLEYAEKDLLNMSGSAPSVFEQI
NGSILGLCKPRTESTPFTIYPFVEPVVFLDAASGVIISPTDEQVLYDVEPYLQLCIVSSS
TPNFFSDTILFAHGEWRNAVSGRQLPAAFCLRFSRPIIFSSAAIKKLSKIASVQLNVEGS
YNLYQYLLNENEECHDLFVRLPGCSTQHYIFDDSMTSSQEDGILRQIPFAHLQDVVFLVS
IIRTQLAHNAFFESLVRAHSRSACVDENVVDIHIASSYIDCFDLQFYLKKNLFIARVAVS
PSKINVSLECVINGAVLPESQHATAILAKSWSLAVMMRSVLRRGGAISLAALEKPFVMNE
NVDNNCDVKISQSWLFVPNIMDSSINYNKTEHEYVVDERINLNCSHDSNTLGRQSPLSLL
ALFKELEKIEELIPPQKPMNGAQQCTAPPRNEMLAPRTNRIHSENTMTINAFSVLDAICD
MAASIDDGESNISEHSSHSSTSQRLRPQIPPQSPSPASERYRTSQAGNFSQLSPLDIARQ
RLAQQAPMSNPTDVFEFDDPPRMNSAGPMGTSAQQFHFPEAGQSPYSFVAMQSTRGPLSA
QPTLKRRGRGRKAGNIGDRMLDPARPILDQNTGLMFRGMNIPTRKPRGTSTARRPRRPRK
AAHMPASPAHSHQFAVNRPMLQRSFSEMPAYPSQMPTVSLSQENRSEASEFDGTEESSDD
ETDPPPPVCTTAMPQSSPQLTASNSTSIPQTTTVGNHPSSSATLSFVNKSSSLTAGLSSI
SSSSPATELAPPSSSPAAISNSSMQSAGLLAHKARKGSLEAVVGKLHCKTTPANISGSTT
SNPYLASDLYDDESEPVIKPPEPVSTKRDSPSISTSSPGARMSPNLAKMNAEQPGYGSEL
KIMIKLKQQASARPSTGPSQFSSGGVPPSMRLIGQPPSSSRSKEEKALLRQKQLKEKNRS
APDERARKAGKRERKGELNSSSGSKKLKIDRPLNEQKTTTAVSPKVEFPQALAFASLKNF
KIPKVMENEKCESPTPTTTTTPAVATSSSSGTHLNVGQNSGCSTVQVVSSTSLSATTTIT
PATTTPSSSSSAGTSSIFPPKPKSILKSPAEPPPPSLFRGMGGMPPMLPGRRPLLPDPRN
VMHHPPRNQFRPLVALPRMIPSVLSGANFMPPPSSSGRWMALAPQRQRSPRSSPSEQSAS
SSGLSDTAAAMSKMQDSPTEALKIVADDE
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaaaagtacgtggggcgtggacctgatagggtcagaatcagtgcttccaaatgt
cagcaagcggttatggaaaaggaaagcatcgtggagaggcaagaacagaagccggtgatg
ggtgatactcagtgtgacaaatacaacctggtcgattttagcctggaagaggttgaagag
gaaattcgtctcgaaaaaattcggcaaacgtcgcttaagttttcgtgggattatttgtca
caacttttacgtcgaaatcttatggagaaacgttttgtactcagtgctgatgataaggag
gacttgatgcaagcagctgctgatatgaggaaacatatgccgtcggatagtgatcgcgat
ttatcaacacatttacgacatcttgctgaaagcttgtcaagtgatttccaagctcatcca
gggtacaagattcggaatgcagatttctcacttgaaattgctgtttctgctgatggtcaa
caaatcaccagttgttcagtatcctggtttggtgagcgggcagtggaagcgcaagcactt
cgtctttacgtttctcgaaacagatgggatcttgtacatacagcactaacaactatgttt
caccttgttccatcagatttgtcaagggacgaaaagatatactgtttgcgatcactggag
tatgctgaaaaagatctgctgaatatgtctggaagtgctccgtcagtttttgaacaaata
aacggtagtattttgggtctctgtaagccgcgaactgaatcaaccccattcaccatttat
ccattcgtcgaacctgtagtattcttggatgctgcttctggtgttatcatatctcctact
gatgagcaagtgttgtatgatgtggagccgtatcttcaattatgcattgtctcaagttca
accccgaacttcttttccgacactatactttttgcacatggagaatggcgcaatgctgtg
tccggccgtcagttaccggctgcattttgtttacggttttcaagaccaattatattttca
tcagctgcaattaaaaagctttctaagattgcatcagttcagttgaatgttgaaggctca
tacaatctgtatcaatatctattgaatgaaaatgaagaatgtcatgatctttttgttcgt
ttaccaggttgttctacgcaacactatatttttgacgactccatgacgtcttcgcaggaa
gatggcattttgagacagataccattcgctcatttgcaagatgtggtttttcttgtgagc
attattcgaacacaactggctcataatgccttcttcgaaagccttgtgagagcacatagt
cgtagtgcatgtgttgatgaaaatgttgttgatatccacattgcatcttcgtacatcgac
tgttttgatcttcagttctatctgaaaaagaatctttttatagcccgtgttgctgtgtca
ccatcaaaaattaatgtttcattggaatgtgtaataaatggagcggtacttccggaatcc
caacatgccacagccattcttgcgaagagttggtcgttggcagtaatgatgcgaagtgtt
ttgcggcgtggaggggccatttcgttggctgcgcttgaaaaaccatttgtgatgaacgaa
aatgttgataataactgcgacgttaaaatatcacaatcttggttgtttgttccaaacata
atggacagcagcattaactacaacaaaacagaacacgaatacgtggtggatgaacgaatt
aatcttaattgttcacatgatagcaacaccttaggaaggcagtcaccactgtctttatta
gcacttttcaaagagcttgaaaagatagaagaactgataccacctcagaaacccatgaat
ggagcgcaacaatgtacggcacctccacgtaacgaaatgcttgcaccacgtacaaatcgt
atccattctgaaaatacgatgacgatcaatgccttctctgtcctggatgcaatttgtgac
atggcagcaagtatcgatgatggtgaatcgaatatttccgagcatagtagccattcatct
actagtcaaaggcttcggccacaaataccgccgcaatcaccttcaccagctagcgaacgt
tatcgtacatcccaagcaggaaatttttcacagctctcgccgctcgatattgcacgccaa
cgtcttgcgcagcaagcaccgatgagtaatccgacagatgtctttgaattcgatgatcca
cctcgcatgaactcagcaggtccgatgggaacatcagctcagcaattccattttccggaa
gcaggacaaagtccatattcctttgtagccatgcaaagtaccagaggtccactgagtgct
cagccgactttgaagcgtcggggtcgaggtcgtaaggcaggaaatataggtgatcgaatg
ttggatccagctcgaccaattcttgatcagaatactggtttgatgtttcgtggtatgaat
attccgacacgcaagcctcgaggaacttcgacagcaaggcgtcctcgaagaccccggaaa
gctgctcatatgcctgcgtctcctgcacattcacatcagtttgccgtaaatcgccctatg
ttacaacgttccttctctgagatgcctgcttacccttcacaaatgccaactgtcagctta
tcacaagaaaatcgatcagaagcatccgaattcgatggaactgaagagtcgtcagatgat
gaaactgatccaccgcctcctgtttgtactactgcgatgccgcaatcgtcacctcaactt
actgcgagtaacagtacttcgattccacaaacaactaccgtcggcaatcatccttcctca
tcagcaacattatcatttgttaataagtcttcatcgttaactgccggtctttcatctatt
tcatcgagcagtccagcaacagaacttgcacctccaagttcatctccagcagcaatcagt
aacagttcaatgcagtcggcgggactcttagcccataaagcacgtaaaggaagtctagaa
gctgtggtagggaagttgcactgtaaaacaactccagcaaacatcagtggttcgacaaca
tcaaatccgtatttggcttcagatttatatgacgatgaatcggaaccagttattaaaccg
cctgaaccagtttctactaagcgtgatagtccatcaatatcgacatcatcccctggtgcc
cgaatgtcgcccaatctagcaaagatgaatgcggaacagccaggttacggttcagagttg
aaaataatgattaaattgaaacagcaggcatccgcgcgaccatctactggaccatcgcag
ttttcatcgggtggtgtgccaccgtctatgcgcttgattggtcagccgccttcgtcatca
cgatcaaaggaagagaaagctcttctacgacaaaaacagttgaaagagaaaaatcgttct
gcaccagatgaacgtgctcgaaaggcgggtaaaagagaacgtaaaggcgaacttaatagt
agcagtggtagtaagaaattgaaaatagatcgaccattaaatgaacaaaaaacaacaaca
gctgtttctccaaaagtggaatttccacaagcactcgcattcgctagtcttaaaaacttt
aagataccaaaggtgatggaaaatgaaaaatgtgagagcccgacgccaacaacaacaacc
actccagctgtagctacctcatcatcctccggtacgcatttaaacgttggtcaaaattcg
ggttgttcaacagtgcaagtggtttcttcaacatcgttatcagcaacaaccacaataact
ccagcaacaacaactccatcttcctcttcatcggctggaacgtcttcaatatttccaccc
aaaccgaaatcaattctgaaatcacctgctgaaccacctcctccatcacttttccgggga
atgggtggtatgccaccaatgctacctggccgacgaccattgctaccggatccacgaaat
gtaatgcatcatccaccaagaaatcaatttagaccgttggtagcactaccccgaatgata
ccgtcagtattgagtggtgctaatttcatgccaccaccttcgtcatcaggccgttggatg
gcactggcaccacaacgacaacgatcacctagaagttcaccgtctgaacagtctgcttcc
agttccggtttgtccgatacagctgcagctatgtccaaaatgcaggatagtccgacagag
gctctgaaaattgttgccgacgacgagtaa
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