Loa loa (eye worm): LOAG_17755
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Entry
LOAG_17755 CDS
T02664
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 24
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
loa
Loa loa (eye worm)
Pathway
loa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOAG_17755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
loa03041
]
LOAG_17755
Enzymes [BR:
loa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LOAG_17755
Spliceosome [BR:
loa03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
LOAG_17755
Complex B
LOAG_17755
Complex C
U2 SnRNP specific factors
LOAG_17755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
ERCC3_RAD25_C
Pico_P2B
Motif
Other DBs
NCBI-GeneID:
9950773
NCBI-ProteinID:
XP_020305909
LinkDB
All DBs
AA seq
412 aa
AA seq
DB search
MRTFLQGRIIDLVKINATNFTRVTFLVFDEADRMFDMGFEAQVQSISDHIRPDRQCLMFS
ATFKSKVEKLAREALTDPVRIVQGEVGEANSDVIQTIEVLENADAKWQWLLNHLVRFSSV
GKVLIFVTKKIHAEDVANGLRVKDFKPILLHGDMLQAERNEKLQAFRKDANILVATDVAA
RGLDIPEIRTVINFDLARDIDTHVHRIGRTGRAGQKGWAYTLVQESDREMAGHLVRNLES
VNQIVPESLLQLAMKSPWFRNSRERGASRPQQRLGLGYKPKTKGPRTDTATTNIARALNF
DGSQKEVKNVLDMAKATDGSTNRLQAMKAAFKSSFSSTFRPSSSDEWATSRAPATDPTPD
WKRKLEEAAEAVNRQVAASINSDFNIHEGSCKKSAGSSDGPTFGSKKRSRWH
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacttttttacagggtcgtataatcgacttagtaaaaattaatgcaacaaatttt
actcgtgtaacttttttggtgtttgatgaagctgatcgaatgtttgatatgggttttgag
gcacaagtgcagtctatatcggatcacatacgtcctgatcggcagtgtctgatgtttagt
gcgacattcaaaagtaaggtagaaaaattggcccgagaagcgcttactgatcctgttcgc
attgtgcaaggagaagttggcgaggcaaattctgatgttatacaaacgattgaagtgcta
gaaaatgcagatgcgaaatggcagtggttgttaaatcatcttgtgagattttcatccgtg
ggaaaagttctcatttttgtgacgaagaagatacatgctgaggatgtagcgaatggtttg
cgtgtgaaagattttaaacctatattattgcatggtgacatgttgcaagcagagcgtaat
gagaaattgcaagcctttcggaaagatgcaaacattttggttgctacagatgtggctgcc
cgtggtctggatattccggagattagaacagtaataaatttcgacctggcgcgcgatatc
gatactcatgtacatcggattggtaggacgggacgtgcaggtcaaaaaggttgggcatat
actttggtgcaagagagcgacagagaaatggctggacatttagtaaggaatctcgagagt
gtcaatcagatcgtgcctgaatcgttactccaattggcaatgaaatcaccatggttccgt
aattctagggaaagaggagcaagccgaccacaacaaagactcggattaggatataagcca
aaaacgaaaggtccgcgtaccgatacagctactactaacatagctagagctttaaatttt
gatggaagtcagaaagaggtgaagaatgtactcgatatggcaaaagctactgatgggtct
acaaatcgtttgcaggctatgaaagctgctttcaagtcttcgtttagcagtacgtttcga
ccatcatctagcgatgaatgggcaacaagtagagccccagcaactgatccaaccccagat
tggaaacgaaaacttgaagaagctgccgaagctgttaaccgacaagttgcagcttcgatt
aatagtgattttaatattcatgaaggaagctgcaaaaaaagtgctggctctagtgacggt
ccaacttttggcagcaagaagagatcacggtggcactga
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