Lysinibacillus pakistanensis: GDS87_03340
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Entry
GDS87_03340 CDS
T06280
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19224
peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
Organism
lpak
Lysinibacillus pakistanensis
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lpak01002
]
GDS87_03340
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lpak01011
]
GDS87_03340
Peptidases and inhibitors [BR:
lpak01002
]
Cysteine peptidases
Family C40
GDS87_03340
Peptidoglycan biosynthesis and degradation proteins [BR:
lpak01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
GDS87_03340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
NLPC_P60
OapA
LRAT
CHAP
DUF1175
Motif
Other DBs
NCBI-ProteinID:
QGG50030
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All DBs
Position
752666..753580
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AA seq
304 aa
AA seq
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MQKSKKWRILALSTIATSFFALQTAEAATYTVQKGDTLSKIAQNHQVTIQDIKTWNNLTK
DTIYVAQKLEVTKQPSNQEVKPLNPSTSTTKPVTPSKPISTSYTVVKGDTLSKIAKQYNV
TLKELKDWNELTTDAIYIGQVLKVSPVASIPEGETIHNNVTSNTGAPSKVTTKDPTLSGQ
AIYKKTIEVANLLVGTPYLYGGNTPEGLDCSGFIFYAFNQSGLKIGRDSSEGYFFGNTSH
VKTPVAGDLVFFENTYKEGISHMGIYLGDNKFVHAGTDGVEISDVTYSYWSSRLVAYKRF
DLLK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaatcaaaaaagtggagaatccttgctttaagtactatcgctacttcatttttc
gcattacagactgcagaagcagcaacttatactgtacaaaaaggggataccctatctaaa
atcgcccaaaaccatcaagtaacgatacaagatatcaaaacatggaataatttaacgaag
gatacgatttatgtagcccaaaaactagaggttacaaagcaaccttcgaatcaagaagtg
aaaccattaaatccatcgacatcgacaacaaaaccagtaacaccatcaaagccaattagt
acttcctacacggtcgttaaaggtgacacattatcaaaaattgctaagcaatataatgtg
acattaaaagagctaaaggattggaacgaattaacaacagatgctatttacattggacaa
gtattaaaggtgtctcctgttgcatccatccctgagggtgaaacaatacataataatgtg
acttcaaatacgggagcgccttcaaaggtaacgacaaaggatccaacattgagtggacaa
gctatctataagaaaacaattgaggtagctaatttgttggtagggacaccttatctttac
ggtggtaacactcctgaggggcttgactgtagtggctttattttctatgcttttaatcaa
agtgggttaaaaattggaagagatagtagtgaagggtatttttttggaaatacatcgcat
gttaagaccccagtagctggagatttagtattttttgagaacacatataaagaaggaata
tcccatatgggtatttatcttggggataataaatttgtccatgcaggaacagatggagtt
gaaatttctgatgtgacatactcttactggtctagcagattggttgcttataaacgattt
gatctattgaagtaa
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