Lacticaseibacillus paracasei subsp. paracasei 8700 2: LBPG_00012
Help
Entry
LBPG_00012 CDS
T02808
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
lpi
Lacticaseibacillus paracasei subsp. paracasei 8700:2
Brite
KEGG Orthology (KO) [BR:
lpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpi03009
]
LBPG_00012
Enzymes [BR:
lpi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
LBPG_00012
Ribosome biogenesis [BR:
lpi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LBPG_00012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
EEQ64563
UniProt:
A0A826HM79
LinkDB
All DBs
Position
811818..812528
Genome browser
AA seq
236 aa
AA seq
DB search
MRLDKYLSHLQFGSRKEVKALIRDKRVRVAGDLITDPGYNVLPGIAVEVNDAQADGPLEV
DYLMNKPAGVITATEDPTQSTVLDLIRPHDYRPGLYPVGRLDKDTTGLLLLTTDGNLGHA
LLSPNRHIAKTYAATLAKTLTADMKQRLETGIDLKDFTTAPAQVVVLPDTDGKRIQITIT
EGKFHQVKRMLLAVDNEVTALTRIAMGPLSLPADLAAGEYRALTDDERTDLDNITR
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgattagataaatatttgagtcatttacaatttggtagtcgaaaagaagttaaggca
cttattcgcgacaagcgggtacgtgtggccggtgatttaatcactgatcctggttacaat
gtgttgccggggatcgcggtcgaggtgaacgatgcccaagcggatgggccgcttgaggtc
gattatttgatgaacaaaccggctggggtgattaccgcaacagaagatcctacgcaatca
acggtgctggatctgatccgaccacatgattaccgaccgggtttatatcccgtaggtcgt
ctggataaagacactactggtctgttgttacttacgaccgatggcaatttaggtcatgca
ctgctttcgcctaatcgtcatattgccaaaacctatgctgcaactttggctaagacatta
actgctgacatgaagcagcgactcgaaaccggcattgatttaaaggacttcacaaccgcc
ccggcacaagtcgttgtcttgccggataccgatggcaaacgcatccagattacaatcacg
gaaggtaagtttcatcaagtcaagcgcatgttgttggcagttgacaatgaggtgacggcc
ttgacgcgaattgctatgggaccattgtcattgcccgccgatttagctgctggggagtat
cgggctttaaccgatgacgaacggactgatttggataatatcactcgttga
DBGET
integrated database retrieval system
