Limnochorda pilosa: LIP_1110
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Entry
LIP_1110 CDS
T04150
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lpil
Limnochorda pilosa
Pathway
lpil03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LIP_1110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpil03400
]
LIP_1110
Enzymes [BR:
lpil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LIP_1110
DNA repair and recombination proteins [BR:
lpil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LIP_1110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
MoCF_biosynth
Motif
Other DBs
NCBI-ProteinID:
BAS26967
UniProt:
A0A0K2SIW3
LinkDB
All DBs
Position
complement(1161567..1162313)
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AA seq
248 aa
AA seq
DB search
MDPIESPAAPEIEALARIAQAVVACRACPRLRAHCQHVARTRKRAFRDQEYWGLPVPGLG
DPNARLLIVGLAPAAHGANRTGRMFTGDASGDWLAEALHRYGFATQPTSTHRDDGFELRE
SYLTASARCAPPDNKPTREEILACRPFLERELAVLDRVQVVILLGRIAFDTYTRLLMEQG
RLQGRPAFQHGAVTELPDGRPRYLLASYHPSRQNTQTGRLTREMWHAVFAQARSLLEGAS
GLAAAARV
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtggaccctatcgaatcccccgcagcacccgagatcgaagccctggcgcggatcgcacag
gccgtcgtcgcttgccgggcctgcccccgcctgcgagcgcactgccaacacgtggcccgg
acacgaaagcgggcctttcgagaccaggagtactggggcctgccggttccgggcctgggc
gaccccaacgcccgcctgctcatcgtggggctggccccggcggcccacggggccaaccgc
accgggcgcatgttcactggcgacgcgtcgggcgactggctggccgaggcgctccaccgg
tacggcttcgcgacccagcccacctccacccaccgggatgacgggttcgagctccgcgaa
agctacctcacggcctcggcgcggtgcgccccgccggacaacaagccgacccgcgaagag
atcctcgcctgccggcccttcctggagcgggagctggccgtgctcgaccgggtccaggtg
gtgatcctcctcggccgcatcgcgttcgacacgtacacccggctgctgatggaacagggt
cgcctccagggccgcccggctttccagcacggcgccgtcaccgagttgccggacggccgg
ccgcgctacctgcttgcgagctaccacccgagccggcagaacacccagacgggccggctc
acccgggagatgtggcacgccgtcttcgctcaggcccgctcgcttctcgagggcgcctcg
gggctggccgcggccgcccgagtctga
DBGET
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