Limnochorda pilosa: LIP_1239
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Entry
LIP_1239 CDS
T04150
Name
(GenBank) hypothetical protein
Organism
lpil
Limnochorda pilosa
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
DUF4595
LysM
RHS
DUF6314
UPF0257
Motif
Other DBs
NCBI-ProteinID:
BAS27096
UniProt:
A0A0K2SIZ5
LinkDB
All DBs
Position
complement(1305080..1309345)
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AA seq
1421 aa
AA seq
DB search
MEESGEQGNHDLSGDPVNPLTGEYILTQTDLTVPGAGLPFSFARTYASNSPVDGPLGAKW
THTYHRTLTMNWNYSMDVRDGQGRRLHYRFVPDPEVPVSSFDGDPLIEIRLDRGYFESSV
LNSNTLARNPDGTYTERTKDGIAYRYAGYWARWRGSNQSPTAGRLMDITDSNGNRLAFHY
DGQGRLTEIVDTAGRKYHLTYEGSLLVELRDPAGRRLQYDYDERGRLKEVINPIGSRWRF
QYDEEGRLTRYTGPRGFSMSYRYDAEGRVVEVVAPDGSLYNRFTYQRGSGYRTEYTDPRG
GTTVYVFDAEGHLTSKRDPLGKVTQYEYDEGFNRIRTVDPTGAVTRARYDGKKNVVELTG
RSGEVYRFQYEPGFNRLTEIVDPLGNRTRMTYDGRGNLVGLSDPLNRTTTYSYDTRGLLR
GVTNSKGQTTEFAYDAHGNVTSITDPSGAVTRFTYDGLGHLLTMTDPLGKTTRLEYDGLG
RVLRVQEPTGAEHRYTYDADGHVLSYVDPSGAVYTWSYDPFGRVVQYTDPLGQVQRFQYD
AGGKLLAATDPLNRTFRYAYDAAGRLTRATNPAGEKTRYAYDELGRLRELTDALGRSTEL
AYDPSGRPVRVEDPSGGVMEYEYDPLGRLIRRVDPGGNLFRWTYDAAGQLVEEESPQGRI
RYTYDPLGNVATRTDLAGRTTRFAYDARGLLTEIVYPDETVRFAYDAAGRMTLASNPALS
ERYAYDAMGRLIEVQNLTLNKTLRTTYDARGLRTSLTDPEGRVFRYAYNPLGRLEQFTGS
EGQRFEFSYDALARLERVRHPNQVETRYGYDVAGRLASLVTGSPFEEILRYTYRYDAVGN
PLERGEGGGAVSRYAYDLLDRLVRVEYPLEAIEAIRAWQDGTFPPGKGLSQGATSYPLAP
TLPVPPTRVPSLPEGEVVEAIPQAPGTSEGRQPPSEPPGQGGKPGGGRPDDPGGAVSWPD
PFARASYTYDRVGNRLTLQTDAGILPYTYGTLNRLLRAGVVTYRYDANGNVVERADQEKT
IRYTYDSRNQLTRVDFPDGTWVRYAYDAFGRRVYREESYWQNAQKQKTEITHYLYDGLDV
LMEYAGTPGEGLPPLAEYYRANGQLLARKMFGFHGRKAPGNEEFLRTRGGLLFYHTDALG
SVQALTDRKGEVVVQYSYEVFGQVWAGVMGPYNRYAFTGKEYDPKTGLYYFGARWYDPEV
GRWASQDLVRDGLNWYVYVDNRPTALVDPLGLFKVDPSGQWGTVEPGDTLSGIARKVYGD
ASLYTEIVRMQPFALRDPDLIYPGQEILLPRTESYPQGYDLSNDSVRADWLTPTLFVIGA
ATGIQVASSGAAAGVAVRVYSWIQSRLSGTGASSSRINLQMFAKKGDIRQVEQVARKFKM
TPEQRRAFGDFIEEMKDDITGGRDLTWKQLEALARQFLEGY
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
gtggaagagtcgggtgagcaaggaaaccacgacctgtcaggcgatccggtcaaccccctg
acgggggagtacatcctgacccaaacggacctcaccgttccgggggccggtctccccttc
tcgttcgcgcggacgtacgcgtccaattcaccggtcgatgggcctctcggcgcgaagtgg
acccacacgtaccatcgaacgctgacgatgaactggaactactccatggacgtccgggac
ggccagggacgccgcctgcactaccgattcgtgccggaccccgaggtgccggtgagctcc
ttcgacggcgacccgttgatcgagatcaggctggaccgcgggtacttcgagtcgtcggtc
ctcaactccaacaccctcgcccgcaaccccgacgggacgtacacggagcggacgaaggac
ggcatcgcgtaccggtacgccggttactgggcccgctggcggggaagcaaccagtcgccg
acggcgggcaggctgatggacatcaccgattccaacggcaatcgcctggcctttcactac
gacggccaggggcggctcacggagatcgtcgatacagcgggccggaagtaccacctcacc
tacgaggggtctctcctggtggagctcagggacccggccggcaggcggctgcagtacgat
tacgatgaaagagggcgcctgaaggaggtgatcaacccgatcgggagccgctggcgtttc
cagtacgatgaggagggtcgcctcacccgctacacgggcccgcgcggcttcagcatgagc
taccggtacgacgccgagggccgggtggtcgaggtcgtcgcgccggatggctctctctac
aaccgcttcacctaccagcgcggcagcggctaccgcaccgagtacaccgacccgagaggc
ggaacgacggtctatgtcttcgatgccgagggccacctgacctcgaagcgggaccccctg
ggcaaggtaacccagtacgagtacgacgaaggcttcaaccgcattcgaacggtcgatccc
accggggcggtgacgcgggcaaggtacgacgggaagaagaacgtggtggagctcaccggc
cggtcgggcgaggtgtaccggtttcagtacgagcccggcttcaacaggctcaccgagatc
gtcgacccccttggaaaccgcacccgcatgacctacgacgggcggggcaatctggtcggc
ctctccgatccgctgaaccggaccacgacgtactcctacgacacccgcggcctccttcgc
ggcgtcacgaattccaagggacagacgacggagtttgcctacgacgcgcacgggaacgtc
acgtccatcacggatccttcaggggcggtcactcgcttcacctacgacggtctgggccac
ctcctcaccatgaccgatcctctcgggaagaccacccgcctcgagtacgacggcctgggg
cgcgtgctccgggtacaggagccgacaggggccgagcaccgctacacgtacgatgccgat
gggcacgtcctctcgtacgtggacccctccggggcggtctacacctggtcctacgatccc
ttcgggcgggtcgtgcaatacacggatccccttggacaggttcaacgcttccagtacgac
gccgggggcaagctcctggcggcgaccgaccctctgaatcggaccttccgctacgcgtac
gacgcggccggccggctgacccgggcgaccaacccggccggggagaagacccgctacgcg
tacgacgagctcggcaggctcagggagctcaccgatgcgctgggaaggagcacggagctg
gcctacgacccgtcgggccggccggtccgcgtcgaggacccctccggcggggtgatggag
tacgagtacgatcctcttggccggctgatccgtcgcgtggacccaggcggcaacctcttc
cgctggacctacgacgcggcggggcagctcgtggaggaggagtcgcctcaggggcggatc
cgctacacctacgaccctctcggcaacgtcgccacccggaccgatctggccgggcgcacc
acccgcttcgcctacgatgcccgagggttgctcaccgagatcgtctacccggacgagacg
gtgcgcttcgcctacgacgcggccggccgcatgactctagcctcgaacccggccctcagc
gagcggtatgcctacgacgcgatggggcggctcatcgaggtgcagaacctcaccctcaac
aagaccctcaggaccacctacgacgcgagggggctccgcaccagcctcaccgacccggag
ggacgggtcttcaggtacgcgtacaaccccctggggcggctcgagcagttcacgggttcc
gaagggcagcggttcgagttctcctacgacgccctggcgaggttggagcgggtgcggcat
ccgaaccaggtggagacgcggtacggctacgacgtcgcgggcaggctcgcgagcctcgtg
accgggagccccttcgaggagatcctccgctacacgtaccgctacgacgcggtgggcaac
cccctggagcggggggagggaggcggggccgtctcccgctacgcctacgacctcttggac
cgcctggtgcgggtggagtaccccctggaggcgatcgaggcgatccgggcctggcaggac
gggacgttccctccggggaagggcctgtcgcaaggcgcgacctcatacccgctcgctccg
accctcccggttccacctacccgcgtgccctccctgccggaaggtgaggtggtggaggcc
atcccgcaggcgcctgggacctcggagggcaggcagcctcccagcgaacctccgggccag
ggagggaagcccgggggcggcaggccggacgacccgggaggcgccgtctcctggccggat
cccttcgcacgggcgagctacacctacgaccgggtgggcaaccggctcacgctgcagacc
gatgcggggatcctcccctacacctacggcaccctcaaccgcctgctccgtgcgggtgtg
gtcacctaccggtacgacgccaacggcaacgtggtcgagcgggcggaccaggagaaaacg
atccgctacacctacgactcgaggaatcagctgacccgggtcgacttccccgacggcacc
tgggtgcgctatgcctacgacgccttcgggaggcgggtctaccgggaggagagctactgg
cagaacgcacagaagcagaagaccgagatcacccactacctctacgacggcctcgacgtg
ctgatggagtacgcggggaccccgggggagggtcttccgcccctggcggagtactaccgc
gcgaacgggcagctcctcgccaggaagatgttcggctttcacgggcggaaggcgccgggg
aacgaggagttcctcaggacccggggaggactgctcttctaccacacggatgctctgggg
agcgtgcaggcgctcacggaccgcaagggcgaggtggtggtgcagtactcctacgaggtc
ttcgggcaggtctgggcgggggtgatgggcccgtacaaccgctacgccttcacggggaag
gagtacgacccgaagacggggctctactacttcggggcgcgctggtacgacccggaggtg
gggcggtgggccagccaggacctggtgagggatgggttgaactggtacgtgtacgttgac
aacaggccaacggccctcgtcgatccgctgggcctcttcaaggtcgatccctcggggcag
tggggtaccgtcgaacctggagacaccctttctggcattgcacgaaaagtctacggtgat
gcgtctctatatacggaaatagtgcgcatgcaaccgttcgcccttcgggatcccgacctt
atctacccaggccaggagatactactaccgcggaccgagagctacccccaggggtacgac
ctcagcaatgactcggtaagggcggattggctgactcccacgctgtttgttatcggcgca
gcgaccggcatccaagtcgcctcttccggcgcagccgcgggtgtggcagtgcgagtgtac
tcctggattcaatcgaggctgtctggaacgggggcatcttcatcacgcatcaatctacag
atgttcgcgaagaaaggcgacatccgtcaggttgagcaggtcgctcgtaagttcaagatg
acgccagagcagcgtcgagcattcggtgatttcatcgaagagatgaaagacgacataacg
ggcggccgcgacctgacttggaagcagctagaagcactggcccgtcagtttctggaggga
tactag
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