Lactiplantibacillus plantarum JDM1: JDM1_1553
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Entry
JDM1_1553 CDS
T00946
Symbol
codV
Name
(GenBank) integrase/recombinase
KO
K03733
integrase/recombinase XerC
Organism
lpj
Lactiplantibacillus plantarum JDM1
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lpj03036
]
JDM1_1553 (codV)
Chromosome and associated proteins [BR:
lpj03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
JDM1_1553 (codV)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
ACT62440
LinkDB
All DBs
Position
complement(1648988..1649932)
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AA seq
314 aa
AA seq
DB search
METDYLTLFLKYIRVERQYSEETAAAYREDIQAFNDFLTANGGAKAYTEVDRLDVNVYLS
HLYDRHLTRNSIARKVSSLRSFYNFLVKNDLAKLNPFVYVQLKKHAARLPRFFYQKELDV
LFQTVYADDSVMGARNAALLEVLYGTGIRLSECVDLQLADVDYDLKMMLIRGKGDKERYV
PFGRYAATALQHYETVCRQPVMAKYGQTHQTVFINRHGGPITGGGIEYVLNQIVKKSSLT
ADIHPHMLRHTFATQMLNNGADLRTVQELLGHTSLSTTQIYAHVTKEHLQQDYRQFFPRA
TRESTKETEHDNEI
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggattatttaaccctctttttaaagtacattcgggttgaacgacagtattcg
gaagagaccgctgctgcttatcgggaagacattcaagcttttaatgatttcttaacggca
aatggcggcgcgaaagcgtatactgaagttgaccggttggacgttaacgtctatttaagt
catttatatgaccggcacttgacccgcaattcaattgctcggaaagtttcaagcttgcgg
tcgttctataactttttggttaagaatgatttagctaaattgaatcccttcgtgtatgtc
caactcaaaaaacacgcggcgcgcttaccccgttttttctatcaaaaggagctggacgta
ttatttcaaaccgtctatgcggatgatagcgtgatgggggcccggaacgcggcgttatta
gaagtcctgtatggtactgggattcggctgagtgagtgtgtcgatctacaattagccgac
gttgattacgacctaaaaatgatgttgattcgtgggaagggcgacaaggaacgttacgtc
ccatttggtcggtacgcggctaccgcgcttcagcattacgaaaccgtctgccggcagccc
gtgatggccaagtatggtcaaacgcaccaaacggtgtttattaatcgtcacggcggcccc
attactggcggcggaatcgaatatgtcttgaatcaaatcgttaagaaaagtagtctaacg
gctgatattcatccccacatgctccggcacacgtttgcaacgcagatgctgaataatggt
gccgatttacggaccgtgcaggagctgttaggtcatacaagtttgtcaacgacgcaaatt
tatgcgcacgtgacaaaggaacatttacaacaagattatcgtcaatttttcccacgagca
acgcgggaatcgacaaaggagactgaacatgacaacgaaatttga
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