KEGG   Lactobacillus plantarum JDM1: JDM1_1961Help
Entry
JDM1_1961         CDS       T00946                                 

Gene name
ddl
Definition
(GenBank) D-alanine-D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
lpj  Lactobacillus plantarum JDM1
Pathway
lpj00473  D-Alanine metabolism
lpj00550  Peptidoglycan biosynthesis
lpj01100  Metabolic pathways
lpj01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:lpj00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    JDM1_1961 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    JDM1_1961 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    JDM1_1961 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:lpj01011]
    JDM1_1961 (ddl)
Enzymes [BR:lpj01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     JDM1_1961 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:lpj01011]
 Precursor biosynthesis
  Amino acid ligase
   JDM1_1961 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATPgrasp_ST ATP-grasp_3 ATP-grasp_4 ATP-grasp Tox-HNH-HHH Chal_sti_synt_C
Motif
Other DBs
NCBI-ProteinID: ACT62848
LinkDB All DBs
Position
complement(2086984..2088096)
Genome map
AA seq 370 aa AA seqDB search
METQKKIHVGMLFGGNSSEHDVSKRSAHNIYDAMDKNKYEIDLFLITKNGIVLSDAATRR
VFDGEPEDQVVAEEMPKLDMSDPLAPIKNLTLAKDIDIFYPVVHGNLGEDGTLQGLFKLL
KKPYVGSGVLASAASFDKDITKQILTHHHIQNTKYVVVTPENRDQMTYAYLQAHVGDHLF
IKPANQGSSIGIHKAENEQEYLDGLADAFKYDYKILVEESIDNPREVECSILGNENPKAS
KLGAIDVPKTDTFYDYNNKFVDASGVTFELPVELPADLTKRIQQMSLDAFKALGLKGMAR
VDFLVSEDGEPYLGEINTLPGFTNISLYPKLWEVSGISYTALIDQLIQLGFDEFKRQSDI
HYDFVALDAE
NT seq 1113 nt NT seq  +upstreamnt  +downstreamnt
atggagacacaaaaaaagatccatgttggtatgttgtttggtggtaactcttcagaacat
gatgtttcgaagcgttcagcgcacaacatttatgatgccatggacaagaataagtacgag
attgacttgtttttaatcacgaagaacgggattgtcttgagtgatgctgcaactcggcgc
gtatttgatggtgaaccagaagatcaagtcgtcgccgaagaaatgccaaagttggacatg
agtgatccattagctcccatcaagaacctgacactggccaaagatattgatatcttctat
ccagtggttcatggtaacttaggggaagatggtactttacaagggctgttcaagttattg
aaaaagccgtatgttggtagtggtgtcttagcgtcggcagctagttttgataaggatatt
acgaagcagattttaacgcatcatcatattcaaaacaccaagtacgtggtggttacaccg
gaaaaccgggaccaaatgacgtacgcttatttacaagcccacgtgggtgatcatttattc
attaagccagccaatcaaggatcgtcgattgggattcataaagctgagaatgaacaagaa
tacttggatggtttggccgatgcgttcaaatatgactacaagattttagttgaagaatcg
attgacaatccgcgtgaagtggaatgctcgatcttaggcaatgaaaatcctaaggcatct
aagcttggtgccattgatgtgccgaagacggacacgttctacgactataataataagttc
gtggatgcgagtggtgtaacgttcgaattaccagtcgaattaccagctgatttgacgaaa
cggattcaacagatgtcgctagacgcgtttaaagcgcttggtctaaaaggaatggcacgc
gtcgatttcttagtgtctgaagatggtgaaccatacttgggtgaaatcaatacgttacct
ggttttactaacattagtttatatccaaagctatgggaagtttcgggcattagttatacg
gcgttgatcgatcaattgatccaacttggttttgatgaattcaaacgtcaatctgatatt
cactatgatttcgttgcgttagacgcggaataa

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