KEGG   Lactobacillus plantarum WCFS1: lp_1144
Entry
lp_1144           CDS       T00115                                 

Gene name
pcrA
Definition
(RefSeq) ATP-dependent DNA helicase PcrA
  KO
K03657  DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
Organism
lpl  Lactobacillus plantarum WCFS1
Pathway
lpl03420  Nucleotide excision repair
lpl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lpl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    lp_1144 (pcrA)
   03430 Mismatch repair
    lp_1144 (pcrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpl03400]
    lp_1144 (pcrA)
Enzymes [BR:lpl01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.12  DNA helicase
     lp_1144 (pcrA)
DNA repair and recombination proteins [BR:lpl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     lp_1144 (pcrA)
   MMR (mismatch excision repair)
    Other MMR factors
     lp_1144 (pcrA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 Exonuc_V_gamma AAA_11 ResIII Terminase_6
Other DBs
NCBI-GeneID: 1063243
NCBI-ProteinID: YP_004889048
UniProt: F9UMU5
LinkDB
Position
1038557..1040824
AA seq 755 aa
MSKESLLAGMNDKQQEAVLDTEGPLLIMAGAGSGKTRVLTHRVAYLIEEQGVNPWNVLAI
TFTNKAAREMRERVGKLLGESAQEVWVSTFHALCVRILRRDIEQIGYNRAFTIAGTSEQR
TLVKRILTEQNIDSKKFDPRSILSAISNAKNDLQTPEMYKESAASPFESVVADVYLQYQR
ELAADQAVDFDDLIMLTIQLFKQNPETLAWYQNKFHYIHVDEYQDTNNAQYTLVNLLADK
YKNLCVVGDADQSIYGWRGANMENILDFEKDYPQADTVMLEQNYRSTKTILSAANAVINN
NSTRRPKKLWTENEPGDKISYYRGQSESDETHFVIAKIQESMQQDKMDYGDFAILYRTNA
QSRVMEESLVKANIPYTMVGGNKFYDRKEIRDVLSYLTLAVNDQDSMNFERVVNEPKRGI
GQTSVEKLRLFADEAGYSMLEAASNVDMANGISARAKGALAKFAATMNELRAMREYLSVT
DLTQEILDRTGYMKALKDAKATKSLEAQARIENIEEFLSVTKQFDDSYQPEDEDSDKFVD
FLADLALVSDVDNVEEEPQAVTLMTLHAAKGLEFPVVFLIGMEEGIFPLSRAMMDEDELE
EERRLAYVGITRAEKKLYLTNAYSRMLYGRRQNNPASRFVEEIEPELLKNENTLDGASST
GPKVPFGADRERRAFTPSYKKNPVGTRATVKKASGTGADKNSWSIGDKVKHRKWGTGTVV
KVSGAGEDAELDIAFKSEGIKRLLAAFAPIQKVQD
NT seq 2268 nt   +upstreamnt  +downstreamnt
gtgtcgaaagaaagcctattggcaggaatgaatgacaagcagcaagaagccgttttagac
acagaaggaccgctactaattatggccggtgcgggctcggggaagacccgtgtattgacg
caccgggtagcttatttaattgaagagcaaggggtcaacccctggaatgttttagcgatt
acgtttacgaacaaggccgcacgcgaaatgcgtgaacgggttggtaagctgttaggtgaa
tcggcgcaggaggtctgggtctcaacgttccatgccctgtgtgtccgaattttacgacgt
gacattgaacaaatcgggtataaccgagcgttcacaatcgccggcactagcgagcaacgg
accttagtcaaacgaatcttgacggaacaaaatatcgattcgaaaaaatttgatccgcgg
tcaatcttatccgcaatttcaaatgcgaaaaatgacttacaaacgccggagatgtataaa
gaatcggctgccagtccctttgagagtgtcgtggcagacgtttatttgcaataccaacgt
gaattagcggctgatcaagccgttgactttgatgatctgattatgctgacgattcaatta
ttcaagcagaatcctgaaacgctggcgtggtaccaaaacaaattccattatattcacgtg
gatgaatatcaagatactaataatgcacagtatacgttagtcaacttgttagctgacaaa
tataaaaatttatgtgtagttggggatgcggatcaatctatctatggttggcggggggcc
aacatggaaaatattctcgatttcgaaaaggattatccgcaagctgacacggtgatgttg
gagcaaaactatcgttcgaccaagacaattttgtcggcggctaatgcagttattaacaat
aattcaacgcggcggccgaagaaattatggactgagaatgaaccgggtgacaagatttct
tattatcgtggtcagagtgaaagtgatgaaactcactttgtcattgccaagattcaagaa
agcatgcagcaggacaaaatggactacggcgattttgcgatcctttatcggacgaacgca
caatcccgggtaatggaagagtcactcgttaaggcgaacatcccttatacaatggtcggt
ggtaataagttctatgaccgtaaagaaattcgggacgtcttatcctacttgactttggca
gtgaacgatcaagattcaatgaactttgaacgggtcgttaatgaacctaagcgcggcatt
ggtcaaacgagtgttgaaaaattgcggttgttcgcggatgaagcgggttattccatgttg
gaagcagctagcaatgttgacatggctaatggcatttcagcacgagcgaagggtgcttta
gcgaagtttgcagcgacgatgaatgaattgcgcgctatgcgggaatacttatccgtgacg
gatttaacacaagagattcttgaccgaacgggttacatgaaggcgttgaaagatgctaag
gcaacgaaatcgttagaggcacaagcccgtatcgaaaacattgaagaattcttgtctgtc
accaaacaattcgatgatagttatcaacctgaagatgaagatagtgacaaattcgtggac
ttcttagcggatttagcactggtttcggatgtggataacgttgaggaagaaccccaagcc
gtgacgctgatgacgttacatgcagcgaaggggctagaatttccggttgttttcttgatt
gggatggaagaaggtatcttcccactgtcccgggcaatgatggatgaagacgagctggaa
gaagaacggcggttagcatacgttgggattacgcgggctgagaagaagctgtacttgacc
aatgcatactcacggatgctttacggtcggcggcagaataatccggcttcccgtttcgtt
gaagaaatcgaaccagaattactcaaaaatgaaaatacgttggatggtgcaagtagcact
ggtcctaaagtcccatttggtgcggatcgtgaacggcgtgcttttacaccttcatataaa
aagaatccagtggggacgcgggccacggtcaagaaggctagtggcacgggtgctgacaag
aatagttggtcgatcggtgataaagtcaagcatcgtaagtggggaaccggaacggtcgtg
aaggtctccggtgctggtgaagatgctgaactagacattgctttcaaatctgaaggaatc
aagcggttattagccgcatttgcaccgatccaaaaagtacaggactag

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