Lactiplantibacillus plantarum WCFS1: lp_1853
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Entry
lp_1853 CDS
T00115
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
lpl
Lactiplantibacillus plantarum WCFS1
Pathway
lpl03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
lp_1853 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpl03032
]
lp_1853 (rnhB)
Enzymes [BR:
lpl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
lp_1853 (rnhB)
DNA replication proteins [BR:
lpl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
lp_1853 (rnhB)
Elongation factors (archaeal)
lp_1853 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Apo-VLDL-II
Motif
Other DBs
NCBI-ProteinID:
CCC79124
UniProt:
Q88W20
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All DBs
Position
complement(1674732..1675499)
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AA seq
255 aa
AA seq
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MPERTIADFKRLLADQPTASLLAAAQADPRKGVQQAYQHYLRQAEKQAVLVTRFNQHMRL
ERDFWAHGGQYVAGIDEVGRGPLAGPVVTAAVVLDDHFDLLEVNDSKQLTAKKRAALMPR
ILEEAVAVGIGVADAQQIDQLNIYEATRVAMAQAVRNLSVRPTRLLVDAMQVPVPIEQTR
LIKGDAKSASISAASIVAKVVRDHLMTMYDQVYPGYDFADNMGYGTAKHLAGLASLGATP
IHRQSFSPVRNAKRV
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgaacgattgcggattttaaacggctactggctgaccaaccaacggcatcg
cttctagccgcggctcaagccgatcctcgcaagggcgtgcaacaggcttatcaacactat
ttgcgacaagctgaaaaacaggcggtgttagtgacacgttttaatcaacatatgcgttta
gaacgggatttttgggcccacggcggacaatacgttgctgggatcgatgaagttggtcgc
ggcccgttagctggaccagtcgtaactgccgctgtagtcttggacgatcattttgatttg
ctagaagtcaatgattcaaagcaattaaccgctaagaaacgggcggccctgatgccacgg
atcctagaagaagcggtcgccgtgggaatcggcgttgcggatgcccaacaaattgatcaa
ttaaacatttatgaggcgacccgagtcgcaatggcccaagccgtccgtaacctgtccgtc
cggccaacacgtttactagttgatgcgatgcaggtgccggtaccaattgaacagacccgt
ctaatcaagggcgatgcgaaaagcgcgagcatctcggcggctagtattgtcgccaaagtc
gtccgggatcacttaatgacaatgtatgatcaagtgtatcccgggtacgactttgctgat
aatatgggctacgggactgctaagcatttggccgggttggccagtctcggcgctacgccg
attcatcgccaatctttttcaccggttcgaaatgctaagcgggtctaa
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