Lactobacillus plantarum WCFS1: lp_2109
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Entry
lp_2109 CDS
T00115
Gene name
uvrC
Definition
(RefSeq) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
lpl
Lactobacillus plantarum WCFS1
Pathway
lpl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
lp_2109 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpl03400
]
lp_2109 (uvrC)
DNA repair and recombination proteins [BR:
lpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
lp_2109 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_HhH_N
GIY-YIG
UVR
HHH_5
HHH_2
5_3_exonuc
AbiGii_2
HHH
Nop
Motif
Other DBs
NCBI-GeneID:
1063895
NCBI-ProteinID:
YP_004889859
UniProt:
Q88VE9
LinkDB
All DBs
Position
complement(1903487..1905301)
Genome map
AA seq
604 aa
AA seq
DB search
MASAHIEHKLSLLPDLPGCYLMKNLNSQIIYVGKAKNLKNRVRSYFKSSHTGKTARLVSE
IADFEFIVTSTDKEAFLLEITLIQKHQPYFNIKLKKGTGYPYIKITNERDPQILIVSDVR
KDGGYYFGPYPNVYAAQETVNFIQKVYPLRRCHGFQKRPCLYYHMGQCLGACFKTVPVAE
YDAQIKRIKSFLNGHVETVKKQLTKRMDQAAADLEFERAAELRDQLNYIEMTVEKQKIIS
NDNTPRDLFNFYLDKGWLSIQVFFIRQARLMKREKRLFPVVSTAPEEMTSFILQFYNRKN
NVLPREVLVPNGLDKQVLSDILGIPVRTPQRGQKKDLLDMAQKNARIVLEEKFRLLELDE
RKTTGAMQEITDALGIPAGHKIEAFDHSHIQGADLVSAMVVFTDGQPNKKLYRKYKLRTV
DHADEAASTREVIRRRYTRLLKEHAALPDLILMDGGEIQLEAAKDVLENELGIATPVAAM
VKNDHHKTADLLASAGDQHLHLDPKSQGFYLLQRIQDEVHRFAITFHRQVHTKHSLSSRL
DEIPGVGPKTRNKLLRKFGSMSKIAGASLEEIQSLGIAKNVAQTVKFSLAGGGVTPKHYQ
KGAT
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgcgcatattgaacataagttatccttgttaccggacttaccaggatgttat
ctgatgaagaacttaaacagtcagatcatttatgtgggtaaggccaagaacttgaaaaat
cgggtgcgttcatatttcaaaagcagccatactggtaagaccgcgcggttagtatcagag
attgcggactttgagtttattgtgacctcaacggataaggaagccttcctgctagaaatt
acgttaattcaaaaacatcaaccgtactttaatattaaattaaaaaagggaaccggttat
ccatacattaagattaccaatgaacgagatccccagatcctgatcgtcagtgatgttcgt
aaagacggtggctactactttgggccatatcccaacgtttacgcggctcaggaaacggtc
aattttattcagaaggtctatccgttgcggcgttgccatggtttccagaagcggccgtgc
ctctattatcatatgggccaatgcttgggagcttgctttaaaacggtgccggtggcagaa
tatgacgctcagatcaagcggattaaatcctttttgaatggtcacgttgaaacggtcaag
aagcagttaactaaacgaatggatcaagcggccgctgacctagaatttgaacgagccgct
gaattacgtgatcaactgaattatattgaaatgacggttgaaaagcagaaaattatttca
aacgataatacgccccgcgacctgtttaatttctatcttgataaaggctggctttcgatt
caggtcttctttattcggcaagcgcggttgatgaagcgcgagaaacgcttgttcccagta
gtgtcaactgcacctgaagaaatgacgagctttatcttgcaattttataatcgcaaaaat
aacgttctaccacgcgaagttttagtccccaacggtcttgataagcaggtcctgagtgac
attctcggaattccggtaaggacccctcaacgcggccagaaaaaggatttgctggacatg
gcacaaaaaaatgctcgaatcgtcttagaagagaagttccggttgttggaattggatgag
cgcaagacgacgggggcgatgcaagaaatcacggatgctttaggcattcctgctggtcat
aaaattgaggcttttgaccactctcatattcagggggccgacttggtttctgccatggtc
gtcttcacggacgggcaaccgaataaaaaattgtatcggaaatataagttgcggacggtc
gatcatgctgatgaagctgcatcgacccgtgaagtgattcggcggcgctatacacggcta
ctgaaggagcatgcagcattgcccgacctgattttgatggatggtggcgagatccagctg
gaagccgctaaggacgtcttagagaacgaattagggattgcaacgccagtcgcggcaatg
gtcaaaaatgaccatcataagacggcggacctactcgcttctgctggtgatcagcatttg
catctagatccgaagagtcaaggattttatttattacaacggattcaagatgaagtgcac
cgctttgcgattacgtttcaccgacaagtccataccaaacattcattgagttcgcgcttg
gacgagatccccggggttgggccgaagacgcgtaataagttgttgcgtaaatttggatcg
atgagtaaaattgctggtgcctcactggaagagattcagtccctgggaattgctaaaaac
gttgcacaaactgtcaaattttcattagccggtggtggtgtaacaccgaagcattatcaa
aagggcgccacatag
DBGET
integrated database retrieval system
