Lactobacillus plantarum WCFS1: lp_2915
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Entry
lp_2915 CDS
T00115
Gene name
uvrA3
Definition
(RefSeq) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lpl
Lactobacillus plantarum WCFS1
Pathway
lpl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
lp_2915 (uvrA3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpl03400
]
lp_2915 (uvrA3)
DNA repair and recombination proteins [BR:
lpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
lp_2915 (uvrA3)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
lp_2915 (uvrA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_29
SMC_N
AAA_21
AAA_15
DnaJ_CXXCXGXG
AAA_16
HypA
AAA_25
RsgA_GTPase
ATPase
AAA_23
DUF463
NACHT
DZR
Anti-TRAP
End_N_terminal
DUF5351
Motif
Other DBs
NCBI-GeneID:
1063311
NCBI-ProteinID:
YP_004890506
UniProt:
F9US03
LinkDB
All DBs
Position
2591590..2594097
Genome map
AA seq
835 aa
AA seq
DB search
MPQTTLPTHIQVRGAHVNNLKNIDIDIPLNEFVAITGRSGSGKSSLAMGVLYAEGARRYL
NALSTFTRRRINQVGKASVDSVQYLPSALALRQRPQVPGVRSTVGTMSESLNILRLAFSR
LSSAVCPNGHRMPPTLDVAENDGYVTCPTCGAKFRAPGAEDFAFNSGGACPTCGGLGQVR
QIDPALIIADENQTIEEGAVASWHLPGRNFMPIVAREIGIPIDIPYKDLSEADKTRVLHG
PKQTVAINIPSAKGKIFHMDNAVYENAFAAVEDSMATTKNERAINRLNRFYKFDTCPDCH
GSRFNPQLFNYELNGQNIATVSDMTVAALHDFATTIVPWLPTKMHHLGQSLVDELLLSLQ
PMEELGLDYLTLSRPGATLSTGELQRIQLGRTLRSATTGVLYVLDEPSVGLHPANVAGLI
KAFRGLVAQGNSVVVVDHDTSIISAADDVIEIGPGAGKHGGTVVGQGTVAAIKRDKKSLI
APFLTGTATLRERPVLTDDALWKKGALAIEVAHHFNIQDITARIPKNRFTTVTGMSGAGK
TTLVLDSLIPALIATAKKRPLPTHVKAFDNGHIRHVVTVDSVPVGKNVRSTVATYTNILD
HLRQLFAATPAAQANSWTASQFSYNVAAGACPTCGGTGQISLDVQYLPDITEVCPQCHGK
RYNKQTLTVKWHGYSIADILDLAVDEALPIFKVQSAIANTLQILHDMGLGYLLLGESTPA
LSGGEAQRLKLTSRIGKRQTGTLFVFDEPSVGLHPLDIQQLVKVFDQLIQQGATVIAIEH
DLDVIANADYVIDMGPAGGINGGNIVATGTPLAVSQNPTSVTGQYLKTHLALFHV
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaaccacgttaccgactcacattcaagtgcgaggcgcacacgtcaataattta
aaaaatatcgatatcgacattccactcaacgaatttgttgcgattactggtcgcagtggg
tccggtaagtcatcactcgcaatgggcgtcctgtacgctgagggggcccgccgctactta
aacgccctgtcaacctttacccgccgccgaatcaatcaggtcggcaaagccagtgttgat
tcagtacaatacttaccatctgcattagcgctacgccaacgcccccaggttcccggcgtc
cgttcaaccgtcggcaccatgtctgaaagcttaaatatcttaaggctagccttctcacga
ctcagctcagcagtttgccccaatggtcaccgcatgccaccaacgctcgatgtggctgaa
aatgatggttacgtcacctgtccgacttgtggcgccaaattcagagcgcccggcgccgaa
gatttcgccttcaattcaggtggggcctgtccgacttgcggtggcctaggccaagttcgc
caaattgacccggcactcattattgctgatgaaaatcaaactatcgaagaaggggccgtt
gcttcttggcacctgcctggacgtaactttatgccgatcgttgcacgcgaaattgggatt
cccatcgatattccgtataaagaccttagtgaagccgataaaacacgcgtattgcatggt
cctaagcaaaccgttgccatcaacattccaagcgctaaaggtaaaatctttcacatggac
aacgctgtctacgagaacgcctttgccgccgttgaagatagtatggcgacgaccaaaaat
gaacgggcaattaatcggctgaatcgcttttacaagtttgatacttgcccagattgtcac
ggatcacgcttcaatcctcagttgtttaactacgaattaaatggtcaaaacattgcgacg
gttagtgatatgactgtcgccgccttgcatgattttgcgaccacgattgtcccgtggcta
cctactaagatgcatcatcttggacaatcccttgttgatgaattgctactcagcctgcaa
cccatggaagaacttggactcgactacctcacactcagtcgtcccggtgcgaccctgtca
actggtgaattacaacgcattcagctcggacgcactctgcgtagcgccacgactggcgtg
ttatatgtccttgatgaaccttccgttggacttcatccagctaacgtggcgggcctaatc
aaagctttccgcgggctagtcgcccaaggaaattccgtcgtggtggttgaccacgacact
agtattatcagtgcagctgatgatgttattgagattggtccgggggctggtaagcacggc
ggtaccgttgtcggacaaggcactgtcgcagccatcaagcgggacaaaaagtccttaatt
gcgccatttctcaccggtactgccactctgcgtgaacgccccgtattaaccgacgatgcg
ctctggaaaaagggggcccttgctattgaggtggctcatcactttaacatccaagacatt
acggcgcgcattcccaaaaaccgtttcacgaccgtcacgggtatgagcggcgctggtaaa
acgactctggtactagatagtttgattccagcactgattgccacagctaaaaagcgacca
cttccaacccacgttaaggcctttgacaatggtcacattcggcacgttgttaccgtcgac
tcagtgcccgttggtaagaatgtacggtcaacggtcgccacttataccaacattctcgac
catctacgccaattattcgccgctaccccagcagcacaagcaaacagttggaccgctagc
caattttcatataacgtcgctgcgggtgcttgcccaacttgtggtggtacgggccaaatc
tctttagatgtgcaatacttgccagacattaccgaagtctgcccccaatgccacggcaag
cgctacaataaacagacgctgactgtcaaatggcatggctattcgattgcggatatttta
gatcttgcggttgacgaggccctaccaattttcaaagtgcaatccgccatcgctaataca
ctccagatcctgcatgatatgggactaggctacttactattaggtgaaagtacgccggca
ctctcgggtggcgaagctcagcgcctgaagctcacctcccgcattggcaaacgccaaacg
ggaacgctctttgtcttcgatgagccttcagtcggtttgcacccgctcgacattcagcaa
ctcgtcaaagtctttgaccaactgattcagcaaggggcaaccgtcattgccatcgaacac
gatctcgacgtaatcgccaacgctgattacgttatcgatatgggacccgcgggcggtatc
aacggtggtaacattgtcgccaccggtaccccattggccgttagtcaaaatccaactagt
gtaacagggcaatatttgaagacgcatttggccctattccacgtttaa
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integrated database retrieval system
