KEGG   Legionella pneumophila subsp. pneumophila Thunder Bay: LP6_2620Help
Entry
LP6_2620          CDS       T02689                                 

Gene name
dacB
Definition
(GenBank) D-alanyl-D-alanine carboxypeptidase
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
lpm  Legionella pneumophila subsp. pneumophila Thunder Bay
Pathway
lpm00550  Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:lpm00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    LP6_2620 (dacB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lpm01002]
    LP6_2620 (dacB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:lpm01011]
    LP6_2620 (dacB)
Enzymes [BR:lpm01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     LP6_2620 (dacB)
   3.4.21  Serine endopeptidases
    3.4.21.-  
     LP6_2620 (dacB)
Peptidases and inhibitors [BR:lpm01002]
 Serine peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   LP6_2620 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:lpm01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   LP6_2620 (dacB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_S13 Peptidase_S11
Motif
Other DBs
NCBI-ProteinID: AGN15509
LinkDB All DBs
Position
complement(2977373..2979139)
Genome map
AA seq 588 aa AA seqDB search
MWAVWSLSSHAASMQFEVDKLINRLNPHVNLGIVVTDLTSGETLYKRNANRLYIPASNMK
LFSEAAALMALGPDYQFKNQLSTSANQLQQGVLHGNLYLHLSGDPSFSREDLKTLLSSLK
DWNITTIQGNVIIDSSLMSIPAYPPGWLTSDLSYSYGAPIAPLMVDSNRLTITVNPGAKA
GAPAIVEVDDGGGTINLNNQATTKASEKGCGVGFYLDPENNLTVRGCVGLGQWAVQQRIA
IKNPFVYAQGMIVSELAKSNIKLNGQVLLGRAPAGTLLIATRYSKPISQLMADTLKPSDN
LYADSLYLHAAAKIKGSPVDWKQAQPVIKNFLQQQTGIDLKDSNFTDGSGLSRYNLVTPA
QTMALLKFLYQRFPLSYEYIAALPISGRDGTLQKRFKTPNQQGFVRAKTGTMTGMNSLSG
YLYTANGHTLAFAMYINRLPGKPAGPGRPLLDALCTYFLQQSPTSSRLARVLSPHSRIKF
QFNPTQIELQRVHQAKWRRLETAVRQVLRGQDVNVVYRGNELIVTDNQSNANSVWKALQS
IGKKYSFAVALSSKVMPVTPSGKPLLLWVQAPLSENKAERTWIIREAV
NT seq 1767 nt NT seq  +upstreamnt  +downstreamnt
atgtgggcagtatggtcactgtcatctcatgcggctagtatgcagttcgaggtggataaa
ttaattaatcggctaaaccctcatgtgaacctggggatagtagtgaccgatctaacctcg
ggcgagacgctatataaacgcaatgccaatcgtttgtatattcctgccagcaacatgaag
cttttttccgaggcagcggctctgatggctttgggtccagactaccaattcaagaatcaa
ctcagtacgagcgccaatcaattacaacaaggtgttttgcacggaaacttgtatttacat
ctcagcggcgatccttcgtttagcagagaagatttaaagacgttgctttcttcactcaag
gattggaatatcacaaccattcaaggtaatgtgatcattgacagtagcctgatgtccatt
cctgcctatcccccaggctggctaacttcggatttatcttatagttatggtgcgccaata
gcacctttgatggttgattccaaccgattaacaatcacggtcaaccccggggctaaagca
ggcgctcctgctattgttgaagtagatgatggcggcggtaccattaacctgaataatcaa
gcgaccacgaaggcgagtgagaaaggatgtggtgtagggttttatttggatcctgagaac
aatttaacggtaagaggctgtgttggattagggcaatgggctgttcagcaacgcatcgct
ataaagaatccttttgtttatgcccaggggatgattgtgagtgagcttgccaagtctaac
attaaattaaatgggcaggttttgcttggaagagctcctgctggtactttattaattgcc
actcgctattcaaagccaatttcccaactgatggcagatactttaaagccttctgataat
ttatatgctgatagtttatacttgcatgctgctgccaaaattaagggtagtcctgtggat
tggaagcaagcacagccagtaattaaaaactttttgcagcaacaaacaggaatcgattta
aaagactcgaattttacagatggttctggattatcacgttataatttggtaactccagcg
caaaccatggcgcttttaaagttcttgtatcaacgtttcccattatcatacgaatacatt
gctgctttacccatctctggtcgggatggtactttgcaaaaacggtttaaaaccccaaat
caacaaggatttgtgcgagccaaaaccgggacgatgacggggatgaacagtttatccggt
tacttgtatactgctaatggccatactttggcttttgctatgtatatcaatagattacca
ggaaaaccagctgggccaggacgtccattattagacgcattatgcacttatttcttgcag
caaagcccaacaagcagtcgactggcacgggtattatctccccacagtcgcattaagttc
caatttaatcctacacaaattgagttacagcgagttcatcaagccaaatggaggcgtttg
gaaacggcagtgaggcaggtcttgagaggacaggatgtgaatgtggtttaccggggcaat
gaattaatcgtgacagacaatcagtctaatgcgaatagcgtttggaaagctttacaatca
attggcaagaaatattcattcgccgtagctttgtcttctaaagtgatgcctgttacacca
tcgggaaaacctttgcttctttgggtgcaagcacctttatctgaaaataaggcagagaga
acctggataattcgggaagcggtataa

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