Lacticaseibacillus paracasei N1115: AF91_08905
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Entry
AF91_08905 CDS
T03050
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lpq
Lacticaseibacillus paracasei N1115
Pathway
lpq03030
DNA replication
lpq03430
Mismatch repair
lpq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AF91_08905
03430 Mismatch repair
AF91_08905
03440 Homologous recombination
AF91_08905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpq03032
]
AF91_08905
03400 DNA repair and recombination proteins [BR:
lpq03400
]
AF91_08905
Enzymes [BR:
lpq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AF91_08905
DNA replication proteins [BR:
lpq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AF91_08905
DNA repair and recombination proteins [BR:
lpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AF91_08905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AHJ33304
UniProt:
A0A806L9H1
LinkDB
All DBs
Position
1788836..1789378
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AA seq
180 aa
AA seq
DB search
MDFIAMDFETANRKRASACSLALVVVQQNKVVDSFYTLINPQMQFDAQNIHIHGITPEMV
QDQPTFDQVWPHIQMFYTPGRIVTAHNAPFDVSVMRLTLDRYGIAAPRYQVIDTVKTSRQ
FLPKLPNHRLDTVSAALHIPLEHHHNALADSYACARILIAENEHFGEARIKSMMKLSKAG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggactttatcgccatggatttcgaaaccgccaatcgcaagcgagcctcagcgtgttca
ttggcgctcgtggtcgtccagcaaaataaggtggttgacagtttttacacccttattaat
ccgcagatgcagtttgatgcccaaaacattcacattcatggcatcacccctgaaatggtt
caagatcagccaacatttgatcaagtttggccgcatattcaaatgttctatacgccaggt
cggatcgtgaccgctcacaatgcaccgtttgatgtttcggttatgcgactgacactggat
cgttacggcattgcggcgccgcgctatcaagtgattgacacggttaaaacctcgcgacaa
tttttgccgaagttgccgaatcatcggttagatactgtcagtgccgccttacacattccg
cttgagcatcaccacaatgccttagcggatagttatgcctgtgcacggattttgatcgcc
gaaaatgagcactttggcgaagcgcggattaaaagcatgatgaagctttcaaaagcgggt
tga
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