KEGG   Limnobaculum parvum: HYN51_03540Help
Entry
HYN51_03540       CDS       T05491                                 

Definition
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
lpv  Limnobaculum parvum
Pathway
lpv00550  Peptidoglycan biosynthesis
lpv01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lpv00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    HYN51_03540
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases [BR:lpv01002]
    HYN51_03540
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:lpv01011]
    HYN51_03540
Enzymes [BR:lpv01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     HYN51_03540
Peptidases [BR:lpv01002]
 Serine Peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   HYN51_03540
Peptidoglycan biosynthesis and degradation proteins [BR:lpv01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   HYN51_03540
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2 Beta-lactamase
Motif
Other DBs
NCBI-ProteinID: AWH87715
UniProt: A0A2Y9TVI9
LinkDB All DBs
Position
2258951..2260177
Genome map
AA seq 408 aa AA seqDB search
MKQMLSTKTFRHTLLKSLTLGAFIALGTTSVVKADDVNLTTIIPAVPQIDAEAYILMDYN
SGKVLAEINADTRRDPASLTKMMTSYVIGQSIKAGKVSLNDNVTISDKAWATGNPEFKGS
SLMFLQPGTQVKVSDLNRGIIIQSGNDACVAMAEHVAGSQDAFVNIMNNYVKALGLQNTH
FGTVHGLDAAGQFSSARDMAIIGQALIRDVPEEYAIYKEKEYYFNNIKQPNRNGLLWDTS
LNVDGIKTGHTSAAGYNLVASATEGNMRLISVVMGGRTFKGREAESKKLLTWGFRFFETV
TPLQVGKEFASEPVWFGDTDRVQLGVDKNASLTIPRGRLNDLKASYTLTNGEINAPLAKG
QAVGTINFQLDGKTIEQRPLVVLNEVQEGGFFGRMVDHIKLLFHRWFG
NT seq 1227 nt NT seq  +upstreamnt  +downstreamnt
atgaaacagatgctatctacaaaaacatttcgccatactctgctcaaaagtctaacttta
ggtgcattcatcgcgctgggtacgacttccgtcgttaaagctgatgatgtaaatcttaca
actatcattccagctgttccgcaaattgatgctgaagcctatattctgatggactataac
tcaggtaaggttttggcagaaatcaatgcggatacccgcagagacccagctagcctaact
aaaatgatgaccagttatgtcattggtcaaagcattaaagcgggaaaagtcagcctaaat
gacaatgtcaccatcagtgataaagcttgggctactggaaatccggagtttaaaggctct
tccctgatgtttttacagccgggcactcaggttaaagtatctgaccttaatcgcggcatt
attattcaatcaggaaatgatgcttgtgtagccatggctgagcacgtcgctggcagtcag
gatgctttcgttaatatcatgaacaactatgtgaaggccttgggattgcaaaatacccac
tttggcacggtacatggtttagatgctgccggtcagtttagctcagcccgagacatggcg
attatcggtcaggcactgattcgtgatgtacccgaagagtacgcgatatataaagagaaa
gagtattacttcaataatatcaaacagccaaaccgcaatggtttactgtgggataccagc
ctgaacgttgacggtataaaaactggtcatacttcagccgcaggttataacctggttgct
tcagcaaccgaaggcaatatgcgtttaatctccgttgttatgggtggacgtacctttaag
gggcgtgaagctgaaagtaaaaaactgctgacttggggcttccgcttctttgaaaccgtt
acccctctacaggtaggcaaagagtttgcttcagaacccgtttggtttggtgataccgac
cgcgttcagttaggtgtagataaaaatgcctcgctgaccattcctcgcggacgtcttaac
gatctgaaagccagctataccctgactaacggcgaaatcaatgcccctctggcgaaaggc
caggctgtcggtaccattaatttccaactggatggcaagaccatcgaacagcgcccatta
gtggtattaaacgaagtacaggaaggtggtttctttggtcgtatggttgaccatatcaaa
ttgctgttccaccgctggtttggctag

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