Limnobaculum parvum: HYN51_10320
Help
Entry
HYN51_10320 CDS
T05491
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lpv
Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpv03032
]
HYN51_10320 (gyrB)
03400 DNA repair and recombination proteins [BR:
lpv03400
]
HYN51_10320 (gyrB)
Enzymes [BR:
lpv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HYN51_10320 (gyrB)
DNA replication proteins [BR:
lpv03032
]
Prokaryotic type
DNA Topoisomerases
HYN51_10320 (gyrB)
DNA repair and recombination proteins [BR:
lpv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYN51_10320 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
AWH88911
UniProt:
A0A2Y9TZH0
LinkDB
All DBs
Position
3622..6042
Genome browser
AA seq
806 aa
AA seq
DB search
MSNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDIV
VTIHSDNSVSVQDDGRGIPTGIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSDKLELVIDREGKTHKQIYRGGVPEAPLKVVGDADRSGTRVRFWPSPDTFTTNL
EFQYDILAKRLRELSFLNSGVSIKLDDERDDKHDHFHYEGGIKAFVEYLNRNKNPIHPSV
FYFTHQSEKDGINVEVSLQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNNYME
KEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESIMAEKLS
DYLLENPSDAKIVVGKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCQERDPALS
ELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGI
GRDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEVIERGYIYIAQPPLYKVK
KGKQEQYIKDDEAMDQYQITTALDGASLFVNPQAPALAGEPLERLVAEYYSVQKMLKRME
RRTPLALLNQLVYQSTLSEEILADKAKTQGWVESLVNILNEKEQHGSTYIALVQENSERA
IFEPLIRIRTHGVDTDYNLNIDFVLGSEYRKMCHLGEQLRGLIEDDAFIERGERRQPVSS
FEQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPEGRRMLQVTIKDAIAADQLFT
TLMGDEVEPRRAFIEQNALKVANLDV
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatacatatgattcctcaagtatcaaggttttaaaaggtctggatgcggtacgt
aaacgcccaggcatgtatatcggtgacaccgacgatggtaccggtctgcaccacatggta
tttgaggttgtcgataacgcaatcgacgaagcgctggctggctactgtaaagacatcgtt
gtgactattcacagcgataactccgtttccgtgcaggatgatggtcgtggtattcctacc
ggcattcacgaagaggaaggcgtttctgccgcagaggtcattatgaccgtactacatgcc
ggcggtaagtttgatgataactcgtataaagtatccggcggtttgcacggcgtgggtgtt
tcggtcgtcaatgcgctgtctgacaaactggaactggttatcgaccgtgagggtaaaacc
cataagcaaatctatcgcggtggtgtgccggaagcacctctgaaagtggtaggcgatgcg
gatagaagcggtactcgcgttcgtttttggcctagtccagacaccttcactactaacctt
gaatttcaatacgacattttggctaaacgcttacgcgagctgtcgttcctgaactccggg
gtctctatcaaactggatgatgagcgcgatgataagcatgaccacttccattatgaaggc
ggcatcaaggcgttcgtagaatacctaaatcgcaataaaaatccgattcatccatccgta
ttctatttcacgcatcagagtgaaaaagacggtatcaacgtagaagtttctctacagtgg
aatgatggtttccaagagaacatctattgctttaccaacaatattccacagcgtgatggt
ggtactcatctggcaggtttccgtgctgcaatgacccgcacgctgaataactatatggaa
aaagagggttacagcaaaaaagccaaagtcagtgctaccggtgatgatgcccgtgaaggc
ctgattgctgtggtgtcggttaaagtgccagatccgaaattctcttcacagactaaagat
aagctggtctcctcagaggttaaatctgctgttgaatccatcatggcggaaaaactgtct
gattacctgctggaaaacccaagcgatgccaaaatcgtggtaggtaaaattatcgatgca
gcgcgtgctcgtgaagcggcacgtaaagcgcgtgaaatgactcgtcgtaaaggggcatta
gatttaggcggtctgccgggtaaactggcagactgtcaggaacgagaccccgcactgtct
gaactctacttagtggaaggggactccgcgggcggctctgccaagcagggacgtaaccgt
aaaaatcaggcgattctgccgctgaaagggaaaatcctcaacgttgagaaagcacgcttc
gacaagatgctctcttctcaagaagtggcaaccctgattactgcgttaggctgcggtatt
ggtcgtgatgaatacaacccggataagctgcgttatcacagtatcattatcatgaccgat
gctgacgtggatggttcacacattcgtaccctgctactgactttcttctatcgtcaaatg
ccggaagtgattgagcgtggctatatctatattgcccaaccaccgttgtataaagtgaag
aaaggcaagcaagagcagtacatcaaagatgatgaagcgatggatcagtaccagatcacc
accgcgttagatggtgcttcattgtttgtgaacccacaggctcctgcgttagcgggtgag
cctttggagcgtttggtcgcagagtattacagcgtccagaagatgctcaagcgcatggaa
cgtcgtacaccgttggcactgctgaatcaactggtctaccagtcgacactgagtgaagaa
atcttggctgataaggctaaaactcaggggtgggttgaatcgctggttaatattcttaat
gagaaagagcaacatggcagtacttatattgctctggttcaggaaaacagcgagcgggct
attttcgagccgcttattcgtatccgtactcatggtgtagacacggattacaacctgaat
attgattttgtattgggcagtgaatatcgcaagatgtgccacttgggtgagcaactgcgt
ggtttgattgaagatgatgcctttattgagcgtggcgagcgccgtcagccagtgagctcc
ttcgagcaggctcttgattggttagttaaggaatcacgccgtgggttatctattcagcgc
tataaaggtctgggagagatgaacccagagcagttgtgggaaaccactatggaccctgaa
ggacgtcgtatgctgcaagtaacgattaaagatgcgattgctgccgatcagctgttcact
acgctgatgggggatgaggttgaacctcgccgcgcctttatcgagcaaaatgcgctgaag
gttgctaacttggacgtgtag
DBGET
integrated database retrieval system
