Limnobaculum parvum: HYN51_12135
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Entry
HYN51_12135 CDS
T05491
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
lpv
Limnobaculum parvum
Pathway
lpv00550
Peptidoglycan biosynthesis
lpv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HYN51_12135
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lpv01002
]
HYN51_12135
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lpv01011
]
HYN51_12135
Enzymes [BR:
lpv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HYN51_12135
Peptidases and inhibitors [BR:
lpv01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
HYN51_12135
Peptidoglycan biosynthesis and degradation proteins [BR:
lpv01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HYN51_12135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
AWH89231
UniProt:
A0A2Y9U0H9
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All DBs
Position
complement(532616..534052)
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AA seq
478 aa
AA seq
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MRLLKVFSGIACSLVITGAQATQIEQYTQLLPEGANLSLMVQKVGASTPSIDYQDKQLTL
PASTQKVVTALAALLQLGADYRFTTTIEGSGPVNNGVLNGDLIVRFSGDPTLKSQQVHSM
VQSLKQQGIRQISGSLVIDTSVFASHDKAPGWSWNDMTQCFSAPPSAAIIDKNCFSIALQ
TSKQEGGIATVQVASYFPVQVSSQVRSYSRNAPNARFCEFDVTAGENLRYTLTGCLTQQD
KPVTLSFAVQDGNEYAAQIVKNELKQAGIQIGNAIRYQTVHSESGKVLAKNQSAPLHDLL
KVMLKSSDNMIADTVFRTMGNKQYDLPGTWRSGSSAVRLVLRQQAGIDIGNTVIADGSGL
SRHNLISADTMMQILQYIARNDSQLDFISMLPTAGQDGTLRARSGFKDAGLEGKVSAKTG
ALQGVYNLAGFMTAASGEKVAFVQFLSSYAMSPQDRSGRKATLAKFESTLYRDLYNSN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttattgaaagttttcagcggaattgcctgttcactggttatcactggtgcacaa
gcgactcaaatagaacaatacacccaattattgcctgagggggccaatctttcattgatg
gtccagaaagtcggcgcatcaacaccctctatcgactatcaggataagcagctaacgtta
ccggccagcacacaaaaagtcgtcaccgcactggccgcgctgttgcagttgggagccgat
tatcgttttaccaccacgattgaaggttctggtccagtcaataatggcgtgttgaatggt
gatttaattgttcgtttcagcggcgatcctaccttgaaaagtcagcaagtccactcgatg
gttcaatcccttaaacaacaggggatccgccagatatcgggtagtctggtaatcgatacg
tcagtatttgccagtcatgacaaagctcccgggtggtcatggaatgatatgacccagtgc
ttcagtgcaccaccatcagccgctattattgataaaaactgcttctctatcgcattacaa
acttcaaaacaggaagggggcatagccacggtgcaagtcgcatcctacttccctgtacag
gtcagcagtcaggtgcgatcttactcaagaaacgcgcccaatgctcgcttttgcgaattt
gacgttaccgccggtgaaaatctgcgttataccctgacaggctgtctcactcagcaagac
aagcctgttactttgtcatttgccgttcaggatggtaatgaatacgcggctcaaatcgtg
aagaatgagctgaaacaggcaggtattcagattggcaatgctattcgctaccagaccgtt
cactctgaatcgggcaaagtattagccaaaaatcagtctgccccactacatgacctgcta
aaagtgatgttgaaaagctcagacaatatgattgccgatacggttttccgcacgatgggt
aataaacaatacgacttaccgggtacctggcgttctggttccagcgcagtccggttagta
ttgcgtcaacaagccggtattgatattggcaacacagtgattgcggacggttctggtttg
tcacgccataatctgatttcagcagacaccatgatgcaaattctgcagtacattgcccgc
aacgatagccaactggattttatttccatgttaccgaccgccggtcaggatggaacgcta
cgtgcacgcagcggttttaaagatgccggtttggaaggtaaagtttctgccaaaacgggc
gcattacagggcgtttataatctggccgggtttatgaccgccgccagtggagagaaagtc
gcttttgttcagttcctttccagctatgcgatgtcaccacaggatcgttctggtcgcaag
gccacgctagcaaagtttgaaagtacgctataccgggatctgtacaacagcaactaa
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