KEGG   Limnobaculum parvum: HYN51_14155Help
Entry
HYN51_14155       CDS       T05491                                 

Gene name
mrcB
Definition
(GenBank) bifunctional glycosyl transferase/transpeptidase
  KO
K05365  penicillin-binding protein 1B [EC:2.4.1.129 3.4.16.4]
Organism
lpv  Limnobaculum parvum
Pathway
lpv00550  Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:lpv00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    HYN51_14155 (mrcB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:lpv01003]
    HYN51_14155 (mrcB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:lpv01011]
    HYN51_14155 (mrcB)
Enzymes [BR:lpv01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.129  peptidoglycan glycosyltransferase
     HYN51_14155 (mrcB)
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     HYN51_14155 (mrcB)
Glycosyltransferases [BR:lpv01003]
 Polysaccharide
  Bacterial polysaccharide
   HYN51_14155 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:lpv01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   HYN51_14155 (mrcB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Transgly UB2H Transpeptidase UvrB_inter
Motif
Other DBs
NCBI-ProteinID: AWH89589
UniProt: A0A2Y9U1W7
LinkDB All DBs
Position
1002487..1004820
Genome map
AA seq 777 aa AA seqDB search
MPPKVKKSRKPSWLRRTVGLCIKLAIVVIALMAFYGIYLDSQIRSRIDGKVWNLPAAVYG
RMVNLEPGMSYSKKEMVDLLNGMQYRNVTKITRPGEYTVQNNNIEMLRRPFDFPDVKEEQ
IRARLEFNNAGLSRIMNLDTGREFGFFRLDPKLITMLQAPNGEQRLFVAGKSFPYPMADM
LIATEDRNFYSHDGISLFSIGRAVLANLSAGRTVQGGSTLTQQLVKNLFLTNERSLSRKL
REAYMAVILDARYSKERILELYMNEVYLGQSGADQIRGFPLASLYFFGRPINELSVDQQA
MLVGMVKGASLYNPWKNPDIVLERRNLVLRLAQQQNVIDQELYGVLSARPLGVQPRGGVI
SPQPAFMQLVHNELQEKLGDKVNDLSGVKIFTTLDPVSQNAAEKAVEDGIPALRAARNVN
DLEAAMVIVDRFSGEVRAVVGGSQPQYAGFNRAVQARRSIGSLAKPPTYLTALSEPNNYR
LNTLLKDDPLSVNIPGNKPWQPQNYDRQFRGRVMLVDALANSLNIPTVNLGLDLGLDKVK
DMLQRLGVPDSSIQTVPAMLLGSTSLTPMEAAQMYQTIGSGGQRAKLSVLRSVLSEDNTV
LFQSLPQAQRVVEPQAAYLTLYAMQQGVARGTSRSLAGKFGNYNLAAKTGTTNDLRDSWF
VGIDGKEVSIAWVGRDNNGPAKLTGANGALTLYRRYLENQTPLALTLTPPEHISMMGTDS
DGNFICNGGDRQLPVWTDNPEGLCVAPQQPVQQQQPPPQQQQNESSAPEWVRDMFGG
NT seq 2334 nt NT seq  +upstreamnt  +downstreamnt
atgccgcctaaagtaaaaaaatcccgtaagcctagctggctacgccgtaccgtcggactt
tgtatcaagctggcgatcgtggttattgccctgatggcattttatggcatctatcttgac
tcacaaatccgtagccgtattgatggtaaggtttggaatctaccggcggcggtgtatggg
cgcatggtaaaccttgaaccgggtatgtcctacagcaagaaagagatggtggatttgctt
aatggcatgcagtatcgcaatgtcactaaaatcacccgtcctggcgagtataccgttcaa
aataataatatcgagatgctacgccgtccgtttgatttccctgacgtcaaagaagagcaa
attcgtgcccgattggaatttaataacgccgggttgtcacgcattatgaatctggatacg
gggcgagagttcggcttcttccgtctcgatcctaaactgattacgatgttgcaggcccct
aacggcgaacagcgcctgtttgtagccggtaaaagcttcccttatccaatggcagatatg
ctgattgccactgaagaccgtaacttctatagccatgacggtattagcctgttctctatt
ggtcgtgcggtattagctaacctctctgcaggtcgtaccgttcaggggggaagtacttta
acgcagcaattggtgaagaacctgttcttaaccaatgaacgttccctgtcgcgcaaatta
cgtgaagcctatatggcggttattctggatgcccgatacagcaaagaacgcattcttgaa
ctgtatatgaacgaagtctatctggggcagagtggtgccgatcagattcgtggtttcccg
ttagccagtctctatttctttggtcgtccaattaatgaattaagtgtcgatcagcaggcc
atgctagtgggcatggtgaaaggggcttccctgtataacccgtggaagaacccggatatc
gttctggagcggcgtaatttggtattgcgtttagctcaacagcaaaatgttatcgatcag
gaactctatggggtgctaagcgctcgaccactgggtgttcagcctcgcggtggggtaatt
tcgcctcagccagcgtttatgcagttagttcataatgaactgcaggaaaagctgggggat
aaagtcaacgatctgtccggggtgaagatttttactacgctcgatcccgtatcgcagaat
gcggcagaaaaagcggtggaagatggcataccggcactacgagctgcgcgtaacgtaaac
gatttagaagcggcaatggtgattgttgaccgctttagtggagaggttcgtgcggtagtg
ggtggttcacagccgcagtatgccggttttaaccgcgcagttcaggcccgtcgttctatt
ggttctttggctaagccacccacttatctgacggcgttgagtgaacctaataattatcgt
ttaaataccttgctgaaagatgatccgctgtcggtcaatattcccgggaataagccgtgg
cagccgcaaaactatgaccgtcagttccgtggccgagtgatgctggttgatgcactggca
aattcgttaaacattccgacggtaaatctcggtctggacttaggtctggataaagtgaaa
gacatgcttcaacgcttgggtgtgccagatagctcaattcaaactgttccggctatgctg
ctgggctcaaccagcctaacgccaatggaagccgcgcagatgtatcaaacgatcggtagc
ggtggtcagcgggcgaagctttctgttttgcgctcagtactctcggaagataataccgtg
ttgttccaaagcttgcctcaggcccagcgcgttgtggagcctcaggcggcttatctgacc
ttatatgctatgcagcaaggggttgctcgcggaacctcgcgttcactggcgggtaagttt
ggtaattataatctggcggcaaaaacggggactaccaatgacctgcgtgatagctggttt
gtgggtattgatggtaaagaggtttccattgcttgggttggtcgtgataataatggcccg
gctaaactgacgggcgctaacggtgcattaaccctgtaccgccgctatctggaaaaccaa
actccactggccctaaccttaacgcctccagagcatatcagtatgatgggcaccgacagc
gatggtaatttcatatgcaacggtggcgatcgccagttaccggtttggactgacaaccct
gaaggcctgtgtgtggcaccacagcagccggttcagcaacaacagccaccgccacaacaa
cagcaaaatgagagcagcgcccctgagtgggtgagggatatgtttggtgggtag

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