Limnobaculum parvum: HYN51_15230
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Entry
HYN51_15230 CDS
T05491
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
lpv
Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpv03032
]
HYN51_15230
03036 Chromosome and associated proteins [BR:
lpv03036
]
HYN51_15230
03400 DNA repair and recombination proteins [BR:
lpv03400
]
HYN51_15230
DNA replication proteins [BR:
lpv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HYN51_15230
Chromosome and associated proteins [BR:
lpv03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HYN51_15230
DNA repair and recombination proteins [BR:
lpv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HYN51_15230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AWH89771
UniProt:
A0A2Y9U236
LinkDB
All DBs
Position
1236968..1237240
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AA seq
90 aa
AA seq
DB search
MNKSQLIDQIAAGADISKAAAGRSLDAIIDAVTDALKNGDQVSLVGFGSFVVRERAARTG
RNPQTGKEIKIAAAKVPAFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatcacaactgatcgaccaaatcgctgcgggagcagatatttctaaggctgca
gctggccgctcattagacgcaatcattgatgcagttactgatgcgctgaaaaacggcgat
caagtttctctggttggctttggttcatttgttgttcgtgagcgtgcagcccgtactggt
cgtaacccacaaactggcaaagaaatcaaaattgcagcagcaaaagttccggcattccgc
gcgggtaaagcgctgaaagacgcagttaactaa
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