KEGG   Lactobacillus paragasseri: LpgJCM5343_03700
Entry
LpgJCM5343_03700  CDS       T05840                                 
Symbol
recR
Name
(GenBank) recombinase RecR
  KO
K06187  recombination protein RecR
Organism
lpw  Lactobacillus paragasseri
Pathway
lpw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lpw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LpgJCM5343_03700 (recR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpw03400]
    LpgJCM5343_03700 (recR)
DNA repair and recombination proteins [BR:lpw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     LpgJCM5343_03700 (recR)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      LpgJCM5343_03700 (recR)
SSDB
Motif
Pfam: Toprim_4 RecR_HhH Toprim RecR_ZnF RecR_C HHH Toprim_2 HHH_5 HHH_8
Other DBs
NCBI-ProteinID: BBD48017
LinkDB
Position
398898..399497
AA seq 199 aa
MQYPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEDDVEDFSKSLMQVKENLHSCFIC
GNITESDPCEICRDANRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPE
EINIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSD
IEYANSITLKRAVQGRTDL
NT seq 600 nt   +upstreamnt  +downstreamnt
atgcaatatccattaccaattgcacgtttaattgataattatatgaagttgcctggtatt
ggtgaaaaaacagcaacgcggttagctttttatacaatggacatgcctgaagatgatgtg
gaagacttttccaagtcattaatgcaggtaaaagaaaatcttcactcttgttttatttgt
ggaaatattaccgagagcgatccatgtgaaatttgccgagatgcaaatcgtgatcgttca
acaattatggtggtagagcagccaaaagatgtaatggcttttgaagaaatgggtgaatat
aacggtttataccatgttttacatggtgttctgtccccaatggatggtgttggcccagaa
gaaattaatattaagagcctaattactagactgcaaaagcaagatgaggttaaagaagtc
attttggctttaaattctagtccagaaggtgaagcaactgcaatgtacttagctaagcta
atcaaaccagccggcttgaaagtgacgcgcctagctgcagggttagctgtaggtagcgat
attgaatatgcaaactcaattactttgaagcgcgctgttcaagggagaacagatctatga

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