Lactobacillus paragasseri: LpgJCM5343_03700
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Entry
LpgJCM5343_03700 CDS
T05840
Symbol
recR
Name
(GenBank) recombinase RecR
KO
K06187
recombination protein RecR
Organism
lpw
Lactobacillus paragasseri
Pathway
lpw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LpgJCM5343_03700 (recR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpw03400
]
LpgJCM5343_03700 (recR)
DNA repair and recombination proteins [BR:
lpw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LpgJCM5343_03700 (recR)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LpgJCM5343_03700 (recR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_ZnF
RecR_C
HHH
Toprim_2
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BBD48017
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Position
398898..399497
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AA seq
199 aa
AA seq
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MQYPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEDDVEDFSKSLMQVKENLHSCFIC
GNITESDPCEICRDANRDRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGPE
EINIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGSD
IEYANSITLKRAVQGRTDL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatccattaccaattgcacgtttaattgataattatatgaagttgcctggtatt
ggtgaaaaaacagcaacgcggttagctttttatacaatggacatgcctgaagatgatgtg
gaagacttttccaagtcattaatgcaggtaaaagaaaatcttcactcttgttttatttgt
ggaaatattaccgagagcgatccatgtgaaatttgccgagatgcaaatcgtgatcgttca
acaattatggtggtagagcagccaaaagatgtaatggcttttgaagaaatgggtgaatat
aacggtttataccatgttttacatggtgttctgtccccaatggatggtgttggcccagaa
gaaattaatattaagagcctaattactagactgcaaaagcaagatgaggttaaagaagtc
attttggctttaaattctagtccagaaggtgaagcaactgcaatgtacttagctaagcta
atcaaaccagccggcttgaaagtgacgcgcctagctgcagggttagctgtaggtagcgat
attgaatatgcaaactcaattactttgaagcgcgctgttcaagggagaacagatctatga
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