Lactobacillus paragasseri: LpgJCM5343_04110
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Entry
LpgJCM5343_04110 CDS
T05840
Symbol
ruvA
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
lpw
Lactobacillus paragasseri
Pathway
lpw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LpgJCM5343_04110 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpw03400
]
LpgJCM5343_04110 (ruvA)
DNA repair and recombination proteins [BR:
lpw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LpgJCM5343_04110 (ruvA)
RecFOR pathway proteins
LpgJCM5343_04110 (ruvA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
HHH_8
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
BBD48058
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All DBs
Position
439924..440502
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AA seq
192 aa
AA seq
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MFEYLKGIVAKIDPAYVVLDVNGIGYKILCPTPYSYQENQPATIYVEQVVRDTGITLYGF
LSLEDKELFLKLLSVSGIGPKSAVAIMAAEDTDSLASAIQNGEVKYLTRFPGVGKKTASQ
IVLDLKGKLGDYVKKSTVAADLSPSLQDAVLALVALGYTQKEVDRITPKLAKLPENTADG
YIKEALALLLKK
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatatctcaaaggaatagtagcaaaaattgatccagcttatgtagtattagat
gtaaatggcattgggtataagattctttgtcccactccttatagctatcaagagaatcag
ccagcaactatttatgttgaacaagttgttagagatacaggaattaccttgtatggcttt
ttatctttagaagacaaagaattatttttaaaattattaagcgtttcaggaattggacca
aaatcggccgtagcgattatggcagctgaggatacggattcgttagccagtgcaattcaa
aatggagaggtaaaatatttaactcgttttccaggagtcggaaagaagactgcttctcag
attgtcttagacttaaaaggaaagttaggcgactatgtgaagaaatcaacagttgctgcc
gatctttcgccgagcctgcaagacgctgtgcttgccttggtagcacttggttatactcaa
aaggaagttgatcgaattactccaaaattagccaagttacctgaaaatactgccgatggc
tatattaaagaagcgttggctttactacttaagaagtaa
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