Lactiplantibacillus paraplantarum: ASU28_03690
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Entry
ASU28_03690 CDS
T04156
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lpx
Lactiplantibacillus paraplantarum
Pathway
lpx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ASU28_03690
09124 Replication and repair
03420 Nucleotide excision repair
ASU28_03690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpx03021
]
ASU28_03690
03400 DNA repair and recombination proteins [BR:
lpx03400
]
ASU28_03690
Enzymes [BR:
lpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
ASU28_03690
Transcription machinery [BR:
lpx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ASU28_03690
DNA repair and recombination proteins [BR:
lpx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ASU28_03690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
ALO03527
UniProt:
A0A370ABL5
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All DBs
Position
complement(797888..800257)
Genome browser
AA seq
789 aa
AA seq
DB search
MATKIGIRQLVEFVLRQGDLNEVKNSQNTALNGAKIHRQLQSSRGEDYDSEVYLKKVVTM
NATDYIIAGRADGIQLNDDGALIEEIKTSDQAFEDLSTNTQTLYWGQIKVYGYLLLQEHP
DLDQVTLQLTYFQVINEKITKTQQVLHRAELDAFFQDLITEYEYWLTLRADLRQQRNTSI
RELPFPFPAFRPGQHELAGAVYKTIRLQKRLFVEAPTGTGKTISTLFPAIKAMGEDVIER
LFYLTAKQSTRHVAEEAVTLMSHDGLKLKSITLTAKDQIRFPEEQDVLPEDNPYMIGYYD
RLKPALKDLLTHEDQITRPIIEQYARKHTVDPFEFSLDTSLFCDVIICDYNYLFDPLVYL
QRFFSESDDDNFFLVDEVHNLVSRSRDMYSAAISDQPISALLKLAQPDKSQPSDDLQREL
KKVRRSFTRISKTLLDDQVTEQVLPDPPDKLLRTLRTFNEFVTDWLAQQKPGPLLDAVRD
YFFACLTFVKIGDLYDGSYQTRFVLDGHHLTIKELCLDPSDFLNRSLELGSGAVLFSATL
TPMAYYQRVLGGEANSLAYQLPSPFPPKHQAILVTQYVQTTYHEREHNVPRIIASLHAML
TAKCGNYLVFFPSYGYLLQIKTAFEAAYPDVATTAQASTMDATARQTFLNQFQSAPAQTL
LGFCVLGGIFSEGIDLRGDRLIGVAIVSVGLPGINPETNLIRDYYDHQNGLGFAYAYQLP
GMNNVLQAAGRLIRSAKDTGIVLLLDQRFASRRYTELFPAHWQYYQTIQSVPQLEATITN
FWHQTEVTH
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaagattgggattcgacaactggtagaattcgtcttgcgacaaggcgactta
aatgaagtaaagaatagccagaacactgcgttaaatggtgccaagattcaccggcagctc
cagagtagtcgtggcgaagactatgatagcgaagtttaccttaaaaaagtcgtcacgatg
aatgccaccgattatattattgctggtcgggcagatggtattcaattaaacgatgacggc
gctttgatcgaagaaatcaaaacttctgatcaagcctttgaagacttaagtaccaataca
cagactctttactggggccaaattaaagtctacggttaccttttactacaagagcaccct
gacctcgatcaagttactttacagctgacttattttcaagttatcaatgaaaaaatcact
aaaactcagcaagttcttcaccgcgccgaactagacgccttctttcaggacttaattaca
gaatatgaatattggctaacactacgggctgatttgcgtcagcaacgaaatacttccatt
agagagcttccatttccatttccagcttttcgacctgggcagcacgaattagctggcgct
gtttataagaccattcgattacaaaaacgattatttgtcgaagcaccaactgggacgggg
aaaacgatctcaacactatttccagctattaaagcaatgggcgaagacgtgattgaacgc
ctcttttacctgactgctaagcaaagtacgcgccacgtcgctgaagaggccgttacatta
atgagtcatgacggtctcaaacttaaaagcattacgctaaccgccaaagatcagattcgc
tttcctgaagaacaagatgtgcttcccgaagataatccttatatgattggctactacgac
cggcttaagccggcactcaaggatttattgactcatgaagaccagattactcgtcccatt
attgaacagtatgctcgcaagcatactgtcgatccgtttgaattctccctcgatacatcg
cttttctgtgatgtgattatttgcgattacaactacctctttgatccgttagtctattta
caacgattttttagcgaaagtgatgacgacaacttctttcttgtcgatgaagttcacaac
ctagttagtcgctctcgtgatatgtactcagcagcgattagcgatcaaccgattagtgcg
ttactaaagcttgcccaacccgataaaagtcaacctagtgatgacttgcaacgcgaactc
aaaaaggttcggcgcagttttacacggatcagtaagaccttgcttgacgatcaagtcacc
gaacaagtattacctgatcccccggacaaattattacgcaccctaagaacttttaacgaa
tttgtgaccgactggttagcacagcaaaagccgggaccgctgcttgacgccgtccgtgac
tatttcttcgcctgtctgacttttgttaagattggcgatctgtacgatggcagctatcag
acacgcttcgtccttgatggccatcacttgacgatcaaggaactctgccttgatccaagt
gactttcttaaccgttccctagaactgggtagtggtgccgtccttttctctgcaacacta
acccccatggcatattaccagcgggtgctcggtggtgaagccaatagtttggcctaccaa
ctgccatcgccatttccaccaaaacatcaggccatcctcgtcactcagtacgttcaaacg
acgtatcacgagcgggaacataacgtgccccggatcattgctagtttacacgccatgttg
acagctaaatgcggcaactacctcgtgttcttcccatcgtatggctatctgctgcagatt
aagacagcctttgaagccgcctatcccgatgtcgcaactactgcacaagcctcgacgatg
gatgcaacagcccggcagacctttttgaaccagtttcagtcagccccagcgcaaacctta
ctcggtttctgcgtactgggtggcatcttctctgaaggtattgatttacgtggcgatcgt
ttaatcggagttgccatcgttagcgttggtttgccagggatcaaccctgaaaccaacttg
attcgggactactacgaccatcaaaatggcctgggatttgcctacgcttatcagctacca
ggtatgaacaacgtcctacaggcagctggtcgcctaattcgtagcgccaaggataccgga
atcgtgctgttattagaccaacgttttgccagccgacgctacaccgagttattcccagca
cactggcaatactatcagacgatccaatcagtgccgcagctcgaagcgaccattaccaac
ttttggcaccaaacggaggtgactcattaa
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