Lactiplantibacillus plantarum 16: Lp16_1798
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Entry
Lp16_1798 CDS
T02698
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lpz
Lactiplantibacillus plantarum 16
Pathway
lpz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Lp16_1798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpz03400
]
Lp16_1798
Enzymes [BR:
lpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Lp16_1798
DNA repair and recombination proteins [BR:
lpz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Lp16_1798
RecFOR pathway proteins
Lp16_1798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_14
AAA_16
nSTAND3
AAA_3
NB-ARC
AAA_22
RNA_helicase
TsaE
Sigma54_activ_2
AAA_25
AAA_24
DUF815
NTPase_1
Bac_DnaA
AAA_33
AAA_18
IstB_IS21
NACHT
Parvo_NS1
AAA_19
AAA_17
ATPase_2
Rad17
ABC_tran
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGO08474
LinkDB
All DBs
Position
complement(1929693..1930703)
Genome browser
AA seq
336 aa
AA seq
DB search
MDDDKLLSGDKADDEEASLEKSLRPQTLAQYIGQARVKHELGVYIEAARKREESLDHVLL
YGPPGLGKTTLAMVIANEMQVNIRTTSGPAIEKPGDLVALLNELEPGDILFIDEIHRLPK
IVEEMLYSAMEDFFVDIVVGQGPTAHPVHFPLPPFTLIGATTRAGMLSAPLRDRFGIVEH
MAYYEVADLEDIVKRTADIFQTSIKPSGAHEIARRSRGTPRIANRLFKRIRDFAEVADQD
AIDEAIVARSLTYLRVDDAGLDETDNKLLRTMLEYYDGGPVGLATIAANIGEETDTIAEV
VEPYLLQIGFLKRTQRGRVVTIKGYQHLGFPYPENK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgacaagttattatccggtgacaaagccgatgacgaagaggcgtcattagaa
aaatcgctccgtccgcaaacgttagcccagtatattggtcaggcccgggtcaagcacgaa
ttaggagtgtatattgaagcggcccgcaagcgtgaggaatccttggatcacgttttgctg
tatggtccaccgggattagggaagaccacgctagcgatggtaatcgccaacgagatgcag
gtcaatatccgcacgaccagtggccctgcaatcgaaaagccaggtgatttggttgcgctc
ttgaatgaactggagccgggtgatatcttatttattgacgaaattcaccggttaccgaaa
atcgttgaagaaatgttgtattcggccatggaagatttttttgtcgatatcgtggtcgga
caggggccaaccgcccatcccgtacactttccactgccgccgtttacgctgattggcgcg
accacccgagctggtatgctgtcagctccgttacgtgaccgatttggaatcgtcgaacat
atggcgtactatgaagttgctgatttggaagatatcgttaagcggactgcagatattttt
caaacgagtatcaaaccatcgggtgcccacgaaattgcgcgtcgctcacggggaacgccc
cgcattgctaatcgcttgttcaagcgaattcgtgattttgcagaagtggcggatcaagat
gccattgatgaggccatcgtggcgcgatcactgacatatttacgcgtagatgatgccggc
ttggatgagactgacaataagctcttacgaacgatgctagagtattatgacgggggtccg
gtcgggcttgctacgattgcggccaatattggtgaagaaacggatacaatcgcggaagtg
gtcgaaccgtacttactccagattgggttcttgaagcgaacacaacgtggacgcgttgtt
acaattaaaggttatcagcatttgggattcccatacccagaaaataaataa
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