Lacticaseibacillus rhamnosus ATCC 8530: LRHK_920
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Entry
LRHK_920 CDS
T01961
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Pathway
lra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LRHK_920 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lra03019
]
LRHK_920 (rny)
Messenger RNA biogenesis [BR:
lra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LRHK_920 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
OmpH
KH_2
Motif
Other DBs
NCBI-ProteinID:
AER63712
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All DBs
Position
873657..875228
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AA seq
523 aa
AA seq
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MSSVTLVSITLAAVIALAVGLLIGFALQKKLHQNSLDRATQTAEGIIEAAKKEAATLKKE
KLLEAKDENHRYRTQLEDELKDRRAEVQKSEHRLNQREDTLDRRDDTLDRKEQSLADREA
NLNKRQQQLDEREQAISSEISKQQTELERIAELSHEQARTQILDQTQSELTHERAVMIKE
SEDEAKEAADKKAKVLIADAIQRSASDIVAETTVTVVNLPNDDMKGRIIGREGRNIRTLE
TLTGIDLIIDDTPQAVVLSGFDPIRREIARIALEKLIQDGRIHPARIEEMVDKARKEMDD
RIREIGEQAIFDVGIHNMHPDLIKILGRLHFRTSYGQNVLDHSIQVAKLAGVMAAELGED
VTLAKRAGLLHDIGKALDHEVDGSHVEIGVELATKYKEPKTVINAIASHHGDVEPTSVIS
VLVAAADAISAARPGARSESLENYLHRLEKLEAIANSHAGVDHSFAIQAGREVRVIVQPE
KLSDDQSVILARDIRNEIEKELEYPGHIKVTVIRETRTVEYAK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagtaacactggtctcaataaccctcgcagcagtcatcgctttagcggtcggt
ttattgatcggatttgcacttcaaaagaagctccaccagaacagtttggatcgagcgacg
cagacagcagaaggtatcattgaggccgctaaaaaagaagcagcgactttaaaaaaagag
aaactgctagaagcaaaagatgagaatcatcgctatcgaacccaacttgaagacgaattg
aaagatcggcgggcggaagtccagaagtcagaacatcgactgaaccagcgagaagatact
cttgatcggcgtgatgacacgcttgatcgtaaagagcagagtcttgctgaccgggaagca
aatttgaacaagcggcagcaacagttagatgaacgtgaacaagctatctcttctgaaatc
agcaaacaacagacagaactcgaacgaattgccgagctaagccatgagcaggctcggact
cagatccttgaccagacacaatcagaattgacgcatgaacgcgccgtgatgattaaagaa
agcgaagatgaagcaaaggaggccgcagataagaaagccaaggtactgattgcggatgca
attcagcgcagtgcttcagatatcgttgccgagacaacggttacggttgttaatttacca
aatgacgacatgaaaggccgaattatcggtcgtgaaggtcgaaatatccggacacttgag
actttgacggggattgacttaattattgacgataccccgcaagccgttgttttgagcgga
tttgatccgattcgacgggaaatcgcgcgaatcgcgttggagaagctcattcaagatggc
cgaattcatccggcccgcattgaagaaatggttgataaggcacgcaaagagatggatgac
cgcattcgtgaaatcggcgaacaagctatttttgatgtgggtattcataacatgcaccct
gacttgattaagattttgggtcgcttgcattttcgtacgagttacggtcagaatgttctg
gatcattcgattcaggttgcaaagctggccggtgtgatggctgctgaattaggagaagat
gttaccttagcaaaacgcgcggggttattacatgatattggtaaggcgctcgatcatgaa
gtcgatggatcccacgttgaaattggggtcgagctagcaacaaagtacaaagaaccaaag
acggtgattaatgccattgcgtcccatcatggtgacgttgaaccaactagtgtcatttcg
gtactagtcgccgccgctgatgctatttccgccgctcgtccaggcgcgcggtcggaatca
cttgaaaattacctgcatcgcttagagaaattggaggctattgccaacagtcatgctggc
gttgaccatagtttcgcgatccaggccggtcgtgaagtacgggtgatcgttcagccagaa
aaactttctgatgatcagagtgtcattttggctcgcgacattcgcaatgaaattgaaaaa
gaattagagtatccgggtcacatcaaggttacagtcattcgagaaacccgaaccgttgaa
tatgctaaataa
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