Lacticaseibacillus rhamnosus GG: LRHM_0915
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Entry
LRHM_0915 CDS
T02100
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lrg
Lacticaseibacillus rhamnosus GG
Pathway
lrg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LRHM_0915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrg03400
]
LRHM_0915
Enzymes [BR:
lrg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LRHM_0915
DNA repair and recombination proteins [BR:
lrg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LRHM_0915
Prokaryotic type
LRHM_0915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAI41442
UniProt:
A0A7S7FP56
LinkDB
All DBs
Position
965372..966061
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AA seq
229 aa
AA seq
DB search
MKTLIHNDWQTVLEPIFESSEYARLHGFLKEEYATKTIYPEMHHIFQAFEWTPFHDVKVV
ILGQDPYHNPHQAVGASFAVAPGVALPPSLQNIYKELQSDLGYPPVHHGYLKAWANQGVL
LLNAVLTVQAGHAYSHQNHGWEALTDAAIAALSARGGVVFILWGNAAKKKAALIDTSKNA
IIASAHPSPLSASRGFFGSRPFSRTNEALEKMGETPINWQLPETVTTEN
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacattaatccataatgattggcagacggttctggaaccgatttttgaaagttcc
gaatatgcacggctgcatggctttttaaaagaagagtatgccactaaaacgatctatccc
gagatgcatcatatcttccaggccttcgaatggaccccgtttcatgatgttaaagtggtg
attttaggccaggatccttaccacaatccgcatcaggcagtgggggctagttttgcggtt
gcgcctggcgttgccttgccaccatcactgcagaatatttataaagaattgcaaagcgac
ttagggtatccacctgtgcaccacggctatcttaaagcgtgggcgaatcaaggcgtttta
ttgctcaatgcggtcctgaccgtgcaggctggacacgcgtattcgcatcagaatcacggc
tgggaagcattaaccgatgccgcgattgccgctttgtcagcgcgcggtggcgtcgtgttc
attttatggggcaatgcggccaagaaaaaagccgccttgattgacacttctaaaaatgcc
atcattgcgtccgcacatccaagtcctttatcagcatcacgtggtttttttggtagtcgg
ccgttttctcgcacgaatgaggcattagagaaaatgggagagacgccgattaattggcag
ctgccagagacggttacgacagaaaattaa
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