Ligilactobacillus ruminis: LRC_00050
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Entry
LRC_00050 CDS
T01626
Symbol
recF
Name
(GenBank) DNA replication and repair protein
KO
K03629
DNA replication and repair protein RecF
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LRC_00050 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrm03400
]
LRC_00050 (recF)
DNA repair and recombination proteins [BR:
lrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LRC_00050 (recF)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_27
AAA_29
DUF2813
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
AEN77339
UniProt:
G2SPI5
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All DBs
Position
3581..4741
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AA seq
386 aa
AA seq
DB search
MRLSNLKLKNFRNYHETKLEFSPNINVLIGENAQGKTNLLESIYVLAMTKSHRTTNDREL
IEFSEKSAFLEGIVEKKTGNLRLSLSLSKKGKTARVNSLETPRLSQYIGKLNVILFSPED
LSLVKGSPAVRRRFIDMEFGQIDAVYLYELTRYRTILRDRNVYLKQLQTKQSTDRVYLEV
LTEQLAKSGAKIILKRLEFLEELENYAKILHADITQQKENLTFKYKCTASIDDLEMNQDA
IEIRLKETFETIVDKEIFQGTTLIGPHRDDVSFKVNGKNVQTYGSQGQQRTTALAVKLAE
IDLMRAKTGEYPVLLLDDVLSELDGERQTHLLKAIQDKVQTFLTTPGLNDIARQLIKQPR
LFRINAGKIEVKPETIIFYPKKENES
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcgactttcaaacctcaaactgaagaattttcgcaattatcacgaaacaaagcttgaa
ttttcaccgaacatcaacgttttgatcggagaaaacgctcaaggaaagacgaatctgctt
gaatcaatctatgttttggcaatgacgaaaagtcacagaacgacgaatgatcgagaatta
atcgagttttcagaaaaaagtgcttttcttgagggaatagttgaaaaaaagaccggaaat
ttacgcttgtcgttgtctttgagcaaaaaaggcaagacggccagggtcaattctttggaa
acgccgcgtttgtctcaatatatcggcaaattaaacgtgattctgttttcaccggaggac
ttgtcattggtcaaaggatccccggccgtcagaagacggttcattgatatggaatttggt
cagattgacgccgtttacctctatgaactgacgcgctatcgcacgattttgcgcgatcga
aacgtctatttgaagcagcttcagaccaaacagtcaacggatcgcgtttatctggaagta
ttgacggagcagcttgcaaaaagcggggcgaaaatcattttaaagcgccttgaattcttg
gaagagcttgaaaactatgcaaaaattttgcatgcagacataacgcagcaaaaagaaaac
ctgacgtttaaatataaatgcacggcaagcatcgatgatcttgaaatgaatcaagatgca
attgaaatcagactaaaggaaacgtttgaaacgatcgtcgacaaggaaatttttcaagga
acgacgttgatcggacctcaccgagacgatgtcagcttcaaagtcaacggcaaaaacgtt
caaacgtacggttctcaaggacagcaacgaacgacggctttggctgtcaaactggccgaa
atcgatctgatgcgtgccaaaacgggcgaatatcccgtcctgcttttggatgacgttttg
tctgagcttgacggagaacgacagactcaccttttaaaagcaattcaagacaaagtgcag
acttttttgacgactccgggattgaatgacatcgcacggcaactgatcaagcagccgcgt
ctttttcgcatcaatgcgggaaaaatcgaggtcaaaccggaaacgatcatcttttaccct
aaaaaagaaaacgaatcatag
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