Ligilactobacillus ruminis: LRC_11920
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Entry
LRC_11920 CDS
T01626
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
lrm
Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrm03009
]
LRC_11920
Enzymes [BR:
lrm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LRC_11920
Ribosome biogenesis [BR:
lrm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LRC_11920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AEN78451
UniProt:
G2SPD8
LinkDB
All DBs
Position
complement(1243687..1244433)
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AA seq
248 aa
AA seq
DB search
MAEVRLQKAMADAGVASRRASEKLILEGRVKVNGVVVKELGTKVKGDDAIEVNGTLIERE
RNKVYYLFYKPRGVISAVKDDKGRKVVTDYFEGEKNRIYPIGRLDYDTSGILLLTNDGEL
ANLLMHPRYKVDKTYVAKVEGLVQSDDLKRLRKGVKMKDGHYSARAKAKVISSDRAKNHS
IVSLTIHEGRNHQVKNMFETIGHPVMKLKRETYDFLTLKGLTSGQYRELSNEEVKTLYEN
ARKNSKLK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggtcagattacaaaaagcgatggctgatgcgggcgttgcctcgcgacgtgca
agcgaaaagctgattcttgaaggacgagtcaaagtcaatggcgttgttgtcaaagagctc
gggaccaaggtcaaaggcgacgatgcgattgaagtgaacggaacgctgattgaacgcgaa
agaaacaaagtatactatcttttttataagccgcgcggcgttatcagtgccgttaaagat
gataaaggccgcaaggtcgttactgattattttgaaggtgagaagaatcggatttatccg
atcggacgtttggattacgatacttcgggcattttgcttttgacaaatgatggagaactg
gcaaacttgctgatgcatccgcgctataaagtcgacaagacgtatgttgcaaaggtagaa
ggacttgtccaaagcgatgatttgaaacgtcttcgcaaaggcgtcaaaatgaaagacggg
cattacagcgcaagagcaaaagccaaggtgatttcaagcgatcgtgccaaaaatcattca
atcgtttctttgacgattcatgaaggaagaaaccatcaggtcaagaatatgtttgagacg
atcggacatccggtaatgaaactcaaacgagagacatacgattttttgacgctgaaaggg
ctgacttcggggcaataccgcgaacttagcaatgaagaagtcaaaacgttgtatgagaac
gcgagaaaaaatagcaagttgaaataa
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