Lactococcus raffinolactis: CMV25_08820
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Entry
CMV25_08820 CDS
T05231
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lrn
Lactococcus raffinolactis
Brite
KEGG Orthology (KO) [BR:
lrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrn03032
]
CMV25_08820 (gyrB)
03400 DNA repair and recombination proteins [BR:
lrn03400
]
CMV25_08820 (gyrB)
Enzymes [BR:
lrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CMV25_08820 (gyrB)
DNA replication proteins [BR:
lrn03032
]
Prokaryotic type
DNA Topoisomerases
CMV25_08820 (gyrB)
DNA repair and recombination proteins [BR:
lrn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CMV25_08820 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ATC61957
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All DBs
Position
1783443..1785404
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AA seq
653 aa
AA seq
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MTTEELQAIQDKKEKAAEYDASQIQVLEGLEAVRMRPGMYIGSTSSEGLHHLVWEIVDNS
IDEALAGFASHIEVFIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGG
GYKVSGGLHGVGSSVVNALSTQLDVTVFKQGQKYYQEYHRGVVGGDLEMIGETDRHGTTV
HFTPDPTIFTETTEFDFQKLAKRVRELAFLNRGLRISITDKRPDESESLHYHYEGGIQSY
VEYLNEEKTVLFEPAIFTEGEMDGIAVEVAMQYTGGYHSMVLSFANNISTHEGGTHEQGF
RTALTRVINNYAKSNKLLKENEENLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEV
SGIVNKLFSEEFGTFLLENPQVARRIVEKGILASKARIAAKRAREVTRKKSGLEISNLPG
KLADCSSNDPTQTEIFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMEKILANE
EIRSLFTAMGTGFGADFDVSKARYQKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAGY
VYIAQPPIYGVKLGDKITYIQPGVNQETELQTAVLEMTTGNRKPIVQRYKGLGEMDDHQL
WETTMDPEHRTMAQVSVEDAAEADQIFDMLMGDRVEPRRDFIEANAQYSTIDI
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacagaagaattacaagcgatacaagataaaaaagaaaaagcagcggagtatgac
gccagtcagatccaagtcttagaaggacttgaagctgttcggatgcggccagggatgtat
atcggctcgacctcatccgaaggcctgcaccatttggtatgggaaatcgtggataactcg
atcgatgaagccttagctggttttgcatcgcatatcgaggtttttatcgagcctgataat
tcaattacggttgtggatgatggccgtggtattccagttgatatccaagaaaaaacgggc
cgtcctgcggtcgaaactgtttttacagtccttcatgctggtggtaaatttggcggtggc
ggctataaagtatcaggtggtctgcacggtgttggctcatctgtcgtcaatgccttgtct
acccaattagatgtcactgtttttaaacaaggtcaaaaatactaccaagagtaccatcgc
ggtgttgtaggtggtgatttggaaatgattggggagacagaccgtcacgggacgactgtt
cactttacgccagacccaacgatttttacggaaacaacagagtttgattttcaaaaattg
gcaaaacgtgtgcgtgagttagctttcttgaaccgtggtttgcgcatttcaatcaccgat
aaacgaccagacgaatccgaaagcctccactatcactatgaaggtgggattcagtcttat
gtcgaatacctcaatgaagaaaagactgtcttatttgaacccgccattttcacagaaggt
gagatggatgggatcgctgttgaagttgccatgcaatacacgggtggctatcactcaatg
gtcttatcatttgccaataatatcagtacccacgagggtgggacgcacgaacaaggcttt
agaactgctctgacgcgcgtgattaacaactatgctaaatcgaacaagctccttaaggaa
aatgaagaaaacctgaccggtgatgatgtgcgggaaggcttaacagccgtgatttcggtt
aaacacccgaacccacagtttgaaggtcaaaccaagacgaaacttggcaactctgaagtc
tcagggattgttaacaaactctttagtgaggaattcggtactttccttttggaaaatcca
caggtcgcaagacgtatcgtggaaaaagggattttagctagcaaggctagaatcgcagcc
aaacgtgcgcgtgaagtaacacggaaaaaatctggtcttgaaatttcaaatctaccaggg
aaactagcagactgttcgtcaaatgatccgacgcaaactgaaattttcatcgtcgaagga
gattctgccggtgggtcagctaagtctggtcggaaccgtgagttccaagccatcttgcca
attcgtggtaagatcctcaacgttgaaaaagctagcatggaaaaaatcctggctaacgaa
gaaattcgctccttatttacagctatgggaacaggatttggtgctgattttgatgtgtct
aaagcccgctaccaaaaactggttatcatgaccgatgccgatgtcgatggtgctcatatt
agaaccttattgttgaccctcttttatcgctatatgcgtcctgttgtcgaagcgggctat
gtttacatcgctcagccaccgatttatggggtaaaactaggtgataagattacctatatt
caacctggagtgaaccaagagacagaactgcaaacagctgtgcttgagatgacaacgggt
aatcgcaagcctatcgttcagcgctataaagggcttggtgaaatggatgatcaccaactc
tgggaaacgaccatggatcctgaacatcggacaatggcacaagtcagtgttgaagatgcc
gcagaagcagatcaaatctttgacatgctgatgggagatcgtgttgaaccacgtcgtgac
ttcatcgaagccaatgcccagtattcaacaattgatatttaa
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