Lacticaseibacillus rhamnosus LOCK900: LOCK900_1328
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Entry
LOCK900_1328 CDS
T02730
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
lro
Lacticaseibacillus rhamnosus LOCK900
Pathway
lro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LOCK900_1328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lro03400
]
LOCK900_1328
DNA repair and recombination proteins [BR:
lro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOCK900_1328
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
UVR
HHH_2
5_3_exonuc
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
AGP71137
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Position
1270250..1272058
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AA seq
602 aa
AA seq
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MASAHIEHKLSLLPDLPGSYQMKDINGKIIYVGKAKNLKNRVRSYFKSSHDGKVAAMVAQ
VADFDYIVTSTNKEAFLLEITLIQKYQPYYNIKLKKGTGYPYIKITNERDPKIEITGTIR
KDGGYYFGPYPNVYAAQETMHFIQKVYPLRRCNGYQGRPCLYYHMGQCLGACFRTVPEKE
YTDQIARIKRFLNGNVSKAKASLTAKMERAAKNLQFERAAEIRDQLYYIEQTVEKQKIIS
TDNTTRDLFNFYMDKGWISIQVFFIRQARLMKRESRLFPVVNTAKEEFESFILQFYSRKN
NVKPREVLVPAGLDNKVLADILEVPVRTPQRGEKRELMALAAKNSKIKLEDKFRLMELDN
RTTVGAMKELMAALKLPMGHVVEAFDHSHIQGADPVSAMVQFVDGQPAKNNYRKYKLDAD
KTHNGADEAANTREVIRRRYTRLLKEHAALPDLILMDGGEIEMNAAKDVLENELNLDIPV
AGMVKNNKHKTAALLFGHADEMINLDPKSQGFYLLERIQDEVHRFAITFHRQLHAKNSLA
SRLEGIKGVGPKTRLKLLRKFKTITKIKEAPLEDIQELGISKRVAQALKLSLTADPTPAR
RV
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgcacacattgaacataagttatcgttactgccggatcttcccggtagctac
caaatgaaagacatcaacgggaagattatttatgtcggcaaagccaaaaatctcaagaat
cgggttcgatcctactttaagagttcgcatgacggaaaagtagcggcaatggtggcacaa
gtggcggattttgactacattgtgacctctacgaataaagaggcgttcttgcttgagatt
acgttaattcaaaagtaccaaccttattacaatatcaagctgaaaaagggcaccggttac
ccttatatcaagatcaccaatgaacgcgaccccaagattgaaattaccgggacgattcgc
aaagacggcggctactattttggcccttatcccaatgtttacgctgcccaggaaaccatg
cactttattcagaaagtgtatccactacgccgctgtaacggctatcagggtcgcccgtgt
ctttattaccatatggggcagtgtctcggcgcttgttttcgcaccgtcccggagaaggaa
tataccgatcagattgcgcggattaaacgctttttgaacggtaatgtcagcaaggccaag
gccagtttgactgccaaaatggagcgcgcggcaaagaatctgcaatttgaacgggcagcc
gagattcgggatcaactttattacattgagcaaacggttgagaagcaaaagattatttca
acggataataccacgcgtgacttgtttaatttttatatggataaaggctggatcagcatt
caggtcttctttattcgtcaggcgcggttgatgaagcgtgagtcgcgcttgtttcccgtg
gtcaatacagctaaagaagagtttgaatcttttatcttacaattctacagccggaaaaat
aatgttaaaccgcgtgaagtattggtgcctgcagggctagataataaggtgctagccgat
attcttgaagtaccggtgcgcacaccccaacgaggcgaaaaacgcgagctgatggcgcta
gcagccaagaacagcaagattaaactggaagataagtttcggttaatggaattagataat
cggacaacggttggggcgatgaaagagctgatggcagccttaaagttaccgatgggccat
gtggtagaagcatttgaccatagtcatatccaaggtgccgatccggtgtctgccatggtt
caatttgtcgatggccaacctgccaaaaacaattatcgcaaatacaagttggatgcggac
aaaacccataatggtgctgacgaagctgccaatacgcgcgaagtgattcgccggcgatac
acgcggctgttaaaggaacatgcggcattgccggatttgattctgatggacggcggtgag
attgaaatgaacgcggctaaagatgtcttggaaaatgaattgaatctcgatattccggtt
gccggaatggtcaagaacaataagcataagacggctgccttgctattcggtcacgccgac
gagatgatcaatttggatccgaagtcgcagggcttctacctgttggaacgtattcaggat
gaagtgcaccggtttgccatcacgttccatcgccagcttcacgccaaaaactcgttggca
tcgcgccttgaaggaattaagggcgtcggacccaagacacgcttaaagttgctgcgtaaa
ttcaagaccatcacaaagatcaaagaagcaccattggaagatattcaggagctaggcatt
tcaaaacgcgtcgcccaggcactgaagctttcgttaacggcagatcccacgccggcacgt
cgggtataa
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