KEGG   Lactobacillus reuteri I5007: LRI_1443Help
Entry
LRI_1443          CDS       T02701                                 

Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
lrt  Lactobacillus reuteri I5007
Pathway
lrt00473  D-Alanine metabolism
lrt00550  Peptidoglycan biosynthesis
lrt01100  Metabolic pathways
lrt01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:lrt00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    LRI_1443 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    LRI_1443 (ddl)
 09160 Human Diseases
  09168 Drug resistance
   01502 Vancomycin resistance
    LRI_1443 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:lrt01011]
    LRI_1443 (ddl)
Enzymes [BR:lrt01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     LRI_1443 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:lrt01011]
 Precursor biosynthesis
  Amino acid ligase
   LRI_1443 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 ATPgrasp_ST ATP-grasp
Motif
Other DBs
NCBI-ProteinID: AGN99652
UniProt: R9WKS8
LinkDB All DBs
Position
complement(1477852..1478988)
Genome map
AA seq 378 aa AA seqDB search
MTKKLHIALLFGGNSSEHDVSKRSAHNIYDALDKEKYDVSLFMFTKDGILLGNEDSQKIF
DGEPEDQVVAEAYQKMDMSSPLAPIMALNEQKEIDFFFPVIHGNLGEDGTIQGLFKLLNK
PYVGSNIAASAMSFDKDLTKKIISQAGIRNTPYVVVTPENRADYSWGRIEEKLGNLTFVK
PAKQGSSVGIHRVTNAEEYEKALDDAFKYDYKILVEQGIANPQEIEISILGNEHPIASKL
GAVRVPKDDPFYDYENKFVDASGVVFELPVKLPQYLVDEITDMALKAYKALGMKGMARID
FLVDSNNVPYLGEPNTLPGFTNISLYPQMWEVSGISYSDLIDRLIQLGLQEFERNSKIKY
DFRKLGTERVGQKKYNED
NT seq 1137 nt NT seq  +upstreamnt  +downstreamnt
atgaccaaaaaattacacatcgctttattatttggtggcaactcctctgaacatgatgtg
tcaaagcgatcagcacataatatctatgatgctcttgataaggaaaagtatgatgtaagt
ctttttatgtttacaaaggatggaattctattaggcaatgaggattctcaaaagattttt
gatggcgaacctgaagaccaagtggtagcagaagcatatcaaaagatggatatgagtagt
ccattggcaccaattatggccttaaacgaacaaaaggaaattgatttcttcttccctgtt
atccatggtaatttaggtgaagatggtacaattcaaggtctctttaagctccttaataag
ccatacgttggttcaaatattgcagctagtgcaatgtcttttgacaaggatcttactaag
aagattattagtcaagctggtattcgcaacaccccttatgtagtagttacgccagaaaac
cgggctgactattcatggggacggattgaagaaaaattagggaatctcacttttgtaaag
ccagctaagcaaggctcctctgttggtattcatcgagttactaacgctgaagaatacgaa
aaagcattagatgatgcctttaagtatgactacaagatcttagtggaacaagggatcgcc
aatcctcaagaaattgagatttcaatcttaggaaatgaacacccaattgcctctaagtta
ggagctgttcgtgtacctaaggatgatccattctatgattacgaaaacaagtttgtggat
gccagcggggttgtttttgaacttcctgttaaattaccacaatacttagttgatgaaatt
acagacatggctttgaaggcatacaaggcattaggcatgaaggggatggcgcggattgac
tttttagttgacagcaataatgtcccttatcttggtgaaccaaatactttaccaggattt
actaacattagtttgtaccctcaaatgtgggaagtttctgggatttcatattccgacttg
attgatcggctaattcaattaggattacaagaatttgaacgaaacagtaagattaagtac
gatttccgtaagcttggtaccgaacgtgttggtcaaaagaaatataacgaagactaa

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