Limosilactobacillus reuteri SD2112: HMPREF0538_20870
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Entry
HMPREF0538_20870 CDS
T01551
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lru
Limosilactobacillus reuteri SD2112
Pathway
lru02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF0538_20870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lru02000
]
HMPREF0538_20870
Transporters [BR:
lru02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HMPREF0538_20870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
DUF87
DUF4536
nSTAND1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AEI57081
UniProt:
F8DPP5
LinkDB
All DBs
Position
complement(863927..865669)
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AA seq
580 aa
AA seq
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MIRIARKNLALWATLGAVLFLLIQVSCDLYLPTVTADLVNRGIVQKDMGVIWSKGIKMLI
VAAIGLLAAGLNVYFAATQSMKVGEKLRSQIYHKVLRFSNREMDEFGDSSLITRSTNDIV
QIQNVMVQMLRMMLQAPVMLVAACVLAYIREPRLTKVFFISLPILAIIVMMVMYFAVPLF
KSIQKKTDRINLIFREGLTGVRVIRAFRQDEREQKRFKTANEDYTQTGIKAFTIVSTLFP
VVTLILGMTNVAIILLGGHLVASMNMQVGDLIAFMTYATQIMISFMMLSMIFVFVPRASA
SAARVNAVLDQPISIHNAPEKDQEKISINQPASLEFKNVDFRFHGAERLALHDLNFKVTA
GQTLAIIGGTGSGKSALVNLIPRLFDIESGEIMVDGVPIKKLSQHNLHEVISITQQQAVL
FSGTIRSNLQFGYEEATNKEMWHALEIAQAADFVREEGGLDAVVEQNGSNFSGGQRQRLA
IARTIIKPASIYVFDDSFSALDFETDAKLRAALAKDPQIQRAVTVIVAQRISTVVDADQI
IVLEAGRVVGQGTHQELKAHNETYQQIIKSQVEKGDVDRA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
ttgatacggatagcacgaaaaaatttagctttatgggcaaccttaggagcagttctcttt
ttactaattcaagtttcctgtgacctatatttgccgacagttaccgccgatcttgttaat
cgtggaattgtccaaaaagatatgggcgtgatttggagtaagggaattaagatgctgatt
gtcgcagcaatcggtcttctcgctgcggggcttaacgtttactttgcggccacccaatca
atgaaggtgggtgaaaagctacgaagccagatctatcataaggttttacgtttctcgaat
cgtgaaatggatgagtttggcgattcatctttaattacgcggtcaaccaatgatattgtg
cagattcaaaatgtcatggtgcaaatgcttcggatgatgcttcaagcgccggttatgctg
gttgctgcgtgtgttttggcttatattcgcgaaccgcggctgacaaaagtgttctttatc
agtttgcctatcttagcgattattgtaatgatggtgatgtactttgcagtgccattattt
aagagtattcagaaaaagacggatcgcattaatctgatcttccgtgaagggctcacagga
gtacgtgttattcgggccttccgccaagatgaacgcgaacaaaaacgttttaaaactgct
aatgaagattacacgcaaaccgggatcaaggcttttacgattgtttcgacattatttccg
gttgtaacgctgattttagggatgactaatgttgctatcatcttacttggtggtcacctt
gtggcaagtatgaatatgcaggtcggtgatttaattgcttttatgacctatgctactcaa
attatgattagttttatgatgctttcaatgatttttgtttttgttccacgggcttcggca
tctgctgcacgggttaacgctgttttagaccagccaattagtattcataatgcaccggaa
aaggatcaagaaaagatttcgattaatcaaccagcttcccttgaatttaaaaatgttgat
tttcgtttccatggggcagaaagactagctttgcatgacttaaactttaaagttacagcg
ggccaaactttagcgattattggaggaactgggtctggtaagtcagctcttgttaactta
atcccccgcctttttgatattgaaagtggggagattatggttgacggtgttccaatcaaa
aaactaagtcagcataatcttcatgaagtgatttcaattactcagcagcaagcggttctc
tttagtgggactattcggtctaaccttcaatttgggtatgaggaagcaacgaataaagaa
atgtggcatgcacttgaaattgcgcaagcagcagatttcgtccgtgaagaaggcggattg
gacgcagttgttgagcaaaacgggagtaacttttctggtggtcaacgtcaacggttagcg
attgctcgaacaattattaagcccgcatcgatttatgtttttgatgactcattttcggcc
ttggattttgaaactgatgcaaaactccgggctgctttagcaaaagacccacaaattcaa
cgtgccgtaacggttatcgtggcccagcgaatctctactgttgttgatgctgatcaaatt
attgtgcttgaagcaggacgggtagttggtcaaggaactcaccaagaattaaaagcacat
aatgaaacttaccaacaaataattaagtcacaagtcgagaaaggggatgttgatcgtgcg
tag
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